QNA41780.1

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Lawrence S. Macalalad (Talk | contribs)
(New page: == QNA41780.1 (SARS-CoV-2 Protein) Structure == <Structure load='RefQNA417801penta.pdb' size='350' frame='true' align='right' caption='SARS-CoV-2 Protein modelled using Raptor X and SymmD...)
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Contents

QNA41780.1 (SARS-CoV-2 Protein) Structure

SARS-CoV-2 Protein modelled using Raptor X and SymmDock and refined through Galaxy

Drag the structure with the mouse to rotate

SARS-CoV-2 Protein modelled using SymmDock (Monomer) and refined through Galaxy

Drag the structure with the mouse to rotate


This model was made using Raptor X and refined using Galaxy. The use of JSmol in Proteopedia [1] and the article describing Jmol [2].

Function

Unknown

Disease

COVID-19

Source Database

UniProt

accession: QNA41780.1

Gene : envelope protein

Amino Acid Length: 75

Physiochemical Characteristics

Percentage of polar amino acides:33.33

percentage of non-polar amino acides:

Theoretical Iso-electric pH:8.6956

Molecular Weight: 83.6504KDa

Hydrophob/Hydrophil Index:1.27

Homology Modelling

SWISSModel

RaptorX (Used for Monomer Model)

GalaxyWeb

LOMETS

IntFold

I-Tasser

SymmDock (Used for Pentamer Model)


References

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

Proteopedia Page Contributors and Editors (what is this?)

Lawrence S. Macalalad

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