6vr6
From Proteopedia
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| ==Structure of ALDH9A1 complexed with NAD+ in space group P1== | ==Structure of ALDH9A1 complexed with NAD+ in space group P1== | ||
| - | <StructureSection load='6vr6' size='340' side='right'caption='[[6vr6]]' scene=''> | + | <StructureSection load='6vr6' size='340' side='right'caption='[[6vr6]], [[Resolution|resolution]] 2.50Å' scene=''> | 
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VR6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VR6 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6vr6]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VR6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VR6 FirstGlance]. <br> | 
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vr6 OCA], [http://pdbe.org/6vr6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vr6 RCSB], [http://www.ebi.ac.uk/pdbsum/6vr6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vr6 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | 
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ALDH9A1, ALDH4, ALDH7, ALDH9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vr6 OCA], [http://pdbe.org/6vr6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vr6 RCSB], [http://www.ebi.ac.uk/pdbsum/6vr6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vr6 ProSAT]</span></td></tr> | ||
| </table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/AL9A1_HUMAN AL9A1_HUMAN]] Converts gamma-trimethylaminobutyraldehyde into gamma-butyrobetaine. Catalyzes the irreversible oxidation of a broad range of aldehydes to the corresponding acids in an NAD-dependent reaction.<ref>PMID:10702312</ref>   | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Aldehyde dehydrogenase 9A1 (ALDH9A1) is a human enzyme that catalyzes the NAD(+)-dependent oxidation of the carnitine precursor 4-trimethylaminobutyraldehyde to 4-N-trimethylaminobutyrate. Here we show that the broad-spectrum ALDH inhibitor diethylaminobenzaldehyde (DEAB) reversibly inhibits ALDH9A1 in a time-dependent manner. Possible mechanisms of inhibition include covalent reversible inactivation involving the thiohemiacetal intermediate and slow, tight-binding inhibition. Two crystal structures of ALDH9A1 are reported, including the first of the enzyme complexed with NAD(+). One of the structures reveals the active conformation of the enzyme, in which the Rossmann dinucleotide-binding domain is fully ordered and the inter-domain linker adopts the canonical beta-hairpin observed in other ALDH structures. The oligomeric structure of ALDH9A1 was investigated using analytical ultracentrifugation, small-angle X-ray scattering, and negative stain electron microscopy. These data show that ALDH9A1 forms the classic ALDH superfamily dimer-of-dimers tetramer in solution. Our results suggest that the presence of an aldehyde substrate and NAD(+) promotes isomerization of the enzyme into the active conformation. | ||
| + | |||
| + | Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1.,Wyatt JW, Korasick DA, Qureshi IA, Campbell AC, Gates KS, Tanner JJ Arch Biochem Biophys. 2020 Jul 24:108477. doi: 10.1016/j.abb.2020.108477. PMID:32717224<ref>PMID:32717224</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6vr6" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| __TOC__ | __TOC__ | ||
| </StructureSection> | </StructureSection> | ||
| + | [[Category: Human]] | ||
| [[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Tanner  | + | [[Category: Tanner, J J]] | 
| - | [[Category: Wyatt  | + | [[Category: Wyatt, J W]] | 
| + | [[Category: Aldehyde dehydrogenase]] | ||
| + | [[Category: Nad]] | ||
| + | [[Category: Oxidoreductase]] | ||
Revision as of 11:35, 26 August 2020
Structure of ALDH9A1 complexed with NAD+ in space group P1
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