This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5td3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of Catechol 1,2-dioxygenase from Burkholderia vietnamiensis==
==Crystal structure of Catechol 1,2-dioxygenase from Burkholderia vietnamiensis==
-
<StructureSection load='5td3' size='340' side='right' caption='[[5td3]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='5td3' size='340' side='right'caption='[[5td3]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5td3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TD3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TD3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5td3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burvg Burvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TD3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TD3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bcep1808_5824 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269482 BURVG])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5td3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5td3 OCA], [http://pdbe.org/5td3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5td3 RCSB], [http://www.ebi.ac.uk/pdbsum/5td3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5td3 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5td3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5td3 OCA], [http://pdbe.org/5td3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5td3 RCSB], [http://www.ebi.ac.uk/pdbsum/5td3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5td3 ProSAT]</span></td></tr>
</table>
</table>
 +
 +
==See Also==
 +
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Burvg]]
[[Category: Catechol 1,2-dioxygenase]]
[[Category: Catechol 1,2-dioxygenase]]
 +
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
[[Category: 2-dioxygenase]]
[[Category: 2-dioxygenase]]

Revision as of 11:30, 16 September 2020

Crystal structure of Catechol 1,2-dioxygenase from Burkholderia vietnamiensis

PDB ID 5td3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools