1cow

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[[Image:1cow.gif|left|200px]]
[[Image:1cow.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1cow |SIZE=350|CAPTION= <scene name='initialview01'>1cow</scene>, resolution 3.1&Aring;
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The line below this paragraph, containing "STRUCTURE_1cow", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=CAT:The+Carboxylate+Group+Of+GLU+Residue+Is+Believed+To+Acti+...'>CAT</scene> and <scene name='pdbsite=PLP:The+Residue+Listed+Is+The+LYS+Within+The+P-Loop+(Phospha+...'>PLP</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5&#39;-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=AUR:AUROVERTIN+B'>AUR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1cow| PDB=1cow | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cow OCA], [http://www.ebi.ac.uk/pdbsum/1cow PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cow RCSB]</span>
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}}
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'''BOVINE MITOCHONDRIAL F1-ATPASE COMPLEXED WITH AUROVERTIN B'''
'''BOVINE MITOCHONDRIAL F1-ATPASE COMPLEXED WITH AUROVERTIN B'''
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The structure of bovine F1-ATPase complexed with the antibiotic inhibitor aurovertin B., van Raaij MJ, Abrahams JP, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 1996 Jul 9;93(14):6913-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8692918 8692918]
The structure of bovine F1-ATPase complexed with the antibiotic inhibitor aurovertin B., van Raaij MJ, Abrahams JP, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 1996 Jul 9;93(14):6913-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8692918 8692918]
[[Category: Bos taurus]]
[[Category: Bos taurus]]
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[[Category: H(+)-transporting two-sector ATPase]]
 
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Abrahams, J P.]]
[[Category: Abrahams, J P.]]
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[[Category: Raaij, M Van.]]
[[Category: Raaij, M Van.]]
[[Category: Walker, J E.]]
[[Category: Walker, J E.]]
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[[Category: atp phosphorylase]]
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[[Category: Atp phosphorylase]]
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[[Category: atp synthase]]
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[[Category: Atp synthase]]
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[[Category: f1-atpase]]
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[[Category: F1-atpase]]
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[[Category: f1f atp synthase]]
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[[Category: F1f atp synthase]]
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[[Category: hydrogen ion transport]]
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[[Category: Hydrogen ion transport]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 12:57:37 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:25:42 2008''
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Revision as of 09:57, 2 May 2008

Template:STRUCTURE 1cow

BOVINE MITOCHONDRIAL F1-ATPASE COMPLEXED WITH AUROVERTIN B


Overview

In the structure of bovine mitochondrial F1-ATPase that was previously determined with crystals grown in the presence of adenylyl-imidodiphosphate (AMP-PNP) and ADP, the three catalytic beta-subunits have different conformations and nucleotide occupancies. Adenylyl-imidodiphosphate is bound to one beta-subunit (betaTP), ADP is bound to the second (betaDP), and no nucleotide is bound to the third (betaE). Here we show that the uncompetitive inhibitor aurovertin B binds to bovine F1 at two equivalent sites in betaTP and betaE, in a cleft between the nucleotide binding and C-terminal domains. In betaDP, the aurovertin B pocket is incomplete and is inaccessible to the inhibitor. The aurovertin B bound to betaTP interacts with alpha-Glu399 in the adjacent alphaTP subunit, whereas the aurovertin B bound to betaE is too distant from alphaE to make an equivalent interaction. Both sites encompass betaArg-412, which was shown by mutational studies to be involved in binding aurovertin. Except for minor changes around the aurovertin pockets, the structure of bovine F1-ATPase is the same as determined previously. Aurovertin B appears to act by preventing closure of the catalytic interfaces, which is essential for a catalytic mechanism involving cyclic interconversion of catalytic sites.

About this Structure

1COW is a Protein complex structure of sequences from Bos taurus. Full crystallographic information is available from OCA.

Reference

The structure of bovine F1-ATPase complexed with the antibiotic inhibitor aurovertin B., van Raaij MJ, Abrahams JP, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 1996 Jul 9;93(14):6913-7. PMID:8692918 Page seeded by OCA on Fri May 2 12:57:37 2008

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