6u1p
From Proteopedia
(Difference between revisions)
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==Crystal structure of VpsU (VC0916) from Vibrio cholerae== | ==Crystal structure of VpsU (VC0916) from Vibrio cholerae== | ||
- | <StructureSection load='6u1p' size='340' side='right'caption='[[6u1p]]' scene=''> | + | <StructureSection load='6u1p' size='340' side='right'caption='[[6u1p]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U1P OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6U1P FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6u1p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U1P OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6U1P FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6u1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u1p OCA], [http://pdbe.org/6u1p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6u1p RCSB], [http://www.ebi.ac.uk/pdbsum/6u1p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6u1p ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">etp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6u1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u1p OCA], [http://pdbe.org/6u1p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6u1p RCSB], [http://www.ebi.ac.uk/pdbsum/6u1p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6u1p ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Production of an extracellular matrix is essential for biofilm formation, as this matrix both secures and protects the cells it encases. Mechanisms underlying production and assembly of matrices are poorly understood. Vibrio cholerae, relies heavily on biofilm formation for survival, infectivity, and transmission. Biofilm formation requires Vibrio polysaccharide (VPS), which is produced by vps gene-products, yet the function of these products remains unknown. Here, we demonstrate that the vps gene-products vpsO and vpsU encode respectively for a tyrosine kinase and a cognate tyrosine phosphatase. Collectively, VpsO and VpsU act as a tyrosine phosphoregulatory system to modulate VPS production. We present structures of VpsU and the kinase domain of VpsO, and we report observed autocatalytic tyrosine phosphorylation of the VpsO C-terminal tail. The position and amount of tyrosine phosphorylation in the VpsO C-terminal tail represses VPS production and biofilm formation through a mechanism involving the modulation of VpsO oligomerization. We found that tyrosine phosphorylation enhances stability of VpsO. Regulation of VpsO phosphorylation by the phosphatase VpsU is vital for maintaining native VPS levels. This study provides new insights into the mechanism and regulation of VPS production and establishes general principles of biofilm matrix production and its inhibition. | ||
+ | |||
+ | A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae.,Schwechheimer C, Hebert K, Tripathi S, Singh PK, Floyd KA, Brown ER, Porcella ME, Osorio J, Kiblen JTM, Pagliai FA, Drescher K, Rubin SM, Yildiz FH PLoS Pathog. 2020 Aug 25;16(8):e1008745. doi: 10.1371/journal.ppat.1008745., eCollection 2020 Aug. PMID:32841296<ref>PMID:32841296</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6u1p" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Bacillo virgola del koch trevisan 1884]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Herbert K]] | + | [[Category: Protein-tyrosine-phosphatase]] |
- | [[Category: Osorio J]] | + | [[Category: Herbert, K]] |
- | [[Category: Rubin | + | [[Category: Osorio, J]] |
- | [[Category: Schwechheimer C]] | + | [[Category: Rubin, S M]] |
- | [[Category: Tripathi | + | [[Category: Schwechheimer, C]] |
- | [[Category: Yildiz | + | [[Category: Tripathi, S M]] |
+ | [[Category: Yildiz, F H]] | ||
+ | [[Category: Dimer]] | ||
+ | [[Category: Hydrolase]] | ||
+ | [[Category: Phosphatase]] | ||
+ | [[Category: Vc0916]] |
Revision as of 06:37, 7 October 2020
Crystal structure of VpsU (VC0916) from Vibrio cholerae
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