Riboswitch 3D structures
From Proteopedia
(Difference between revisions)
(New page: ==3D structures of riboswitch== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Adenine riboswitch **1y26, [[...) |
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**[[2xo1]] - BsGR aptamer domain + adenine derivative<br /> | **[[2xo1]] - BsGR aptamer domain + adenine derivative<br /> | ||
**[[3g4m]], [[3ger]] - BsGR + guanine derivative<br /> | **[[3g4m]], [[3ger]] - BsGR + guanine derivative<br /> | ||
| - | **[[2xnz]] - BsGR aptamer domain + guanine derivative<br /> | + | **[[2xnz]], [[6ubu]], [[6uc7]], [[6uc8]], [[6uc9]] - BsGR aptamer domain + guanine derivative<br /> |
**[[2xo0]] - BsGR aptamer domain + triazine derivative<br /> | **[[2xo0]] - BsGR aptamer domain + triazine derivative<br /> | ||
**[[5c7u]], [[5c7w]] - BsGR + hypoxanthine<br /> | **[[5c7u]], [[5c7w]] - BsGR + hypoxanthine<br /> | ||
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*Pre-queosine riboswitch | *Pre-queosine riboswitch | ||
| - | **[[3fu2]], [[3k1v]] – | + | **[[3fu2]], [[3k1v]] – BsPreq1R + queosine<br /> |
| - | **[[3gca]] – | + | **[[3gca]] – TtPreq1R + queosine<br /> |
| - | **[[3q50]], [[3q51]] – | + | **[[3q50]], [[3q51]] – TtPreq1R aptamer domain + queosine<br /> |
| - | **[[4jf2]], [[5d5l]] – | + | **[[4jf2]], [[5d5l]] – Preq1R + GTP + deaza-aminomethyl guanine – ''Lactobacillus rhamnosus''<br /> |
| - | **[[4rzd]] – | + | **[[4rzd]] – Preq1R + GTP + deaza-aminomethyl guanine – ''Faecalibacterium prausnitzii''<br /> |
| + | **[[6vuh]], [[6vui]] – Preq1 – ''Caldanaerobacter subterraneus''<br /> | ||
*C-di-GMP riboswitch | *C-di-GMP riboswitch | ||
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**[[4lvv]], [[4lvx]], [[4lvw]], [[4lvy]], [[4lvz]], [[4lw0]] – THFR + purine derivative – synthetic<br /> | **[[4lvv]], [[4lvx]], [[4lvw]], [[4lvy]], [[4lvz]], [[4lw0]] – THFR + purine derivative – synthetic<br /> | ||
**[[3sd3]] – THFR (mutant) + pteridine derivative – synthetic<br /> | **[[3sd3]] – THFR (mutant) + pteridine derivative – synthetic<br /> | ||
| + | **[[6q57]] – THFR + pterin derivative – ''Streptococcus mutans''<br /> | ||
*Fluoride riboswitch | *Fluoride riboswitch | ||
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**[[4frg]], [[4frn]], [[4gma]], [[4gxy]] – CoR + aptamer domain – ''Marine metagenome''<br /> | **[[4frg]], [[4frn]], [[4gma]], [[4gxy]] – CoR + aptamer domain – ''Marine metagenome''<br /> | ||
| + | **[[6vmy]] – BsCoR <br /> | ||
*yybp-ykoy riboswitch | *yybp-ykoy riboswitch | ||
Revision as of 10:33, 26 October 2020
3D structures of riboswitch
Updated on 26-October-2020
