This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


User:Karsten Theis/transition proposal

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 32: Line 32:
Original delays: <scene name='77/779435/Atp/6'>slow move</scene>
Original delays: <scene name='77/779435/Atp/6'>slow move</scene>
- 
- 
-
==SAT version 2==
 
-
Idea: each drawing command adds to the scene, rather the set the representation of the selected atoms.
 
- 
- 
-
===Selection===
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>select protein</script>
 
-
<text>protein</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>select not protein</script>
 
-
<text>not protein</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>select sidechain</script>
 
-
<text>sidechain</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>select _C and sidechain</script>
 
-
<text>sidechain carbons</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>select sidechain or *.CA</script>
 
-
<text>sidechain and CA</text>
 
-
</jmolButton></jmol>
 
- 
-
===Draw===
 
- 
-
<jmol>
 
-
<jmolButton>
 
-
<script>wireframe 0.1</script>
 
-
<text>protein</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>spacefill on</script>
 
-
<text>spacefill</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>spacefill 0.3</script>
 
-
<text>balls</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>cartoon only; cartoon off</script>
 
-
<text>erase</text>
 
-
</jmolButton></jmol>
 
- 
- 
- 
-
===Color===
 
- 
-
<jmol>
 
-
<jmolButton>
 
-
<script>color group</script>
 
-
<text>rainbow</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>color cyan</script>
 
-
<text>cyan</text>
 
-
</jmolButton></jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script>color cpk</script>
 
-
<text>cpk</text>
 
-
</jmolButton></jmol>
 
</StructureSection>
</StructureSection>

Revision as of 13:08, 28 October 2020

UvrB in complex with ATP

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Karsten Theis

Personal tools