Jmol/Using the console

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Because bonds of side chains and modifications are drawn in a single command, the covalent links between them will also be drawn.
Because bonds of side chains and modifications are drawn in a single command, the covalent links between them will also be drawn.
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Here is an example, <scene name='78/786673/Gal_overal_view/1'>galactosidase</scene>, and the [http://proteopedia.org/wiki/index.php/Talk:Garman_lab:_Interconversion_of_lysosomal_enzyme_specificities Jmol commands used].
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Here is an example, <scene name='78/786673/Gal_overal_view/2'>galactosidase</scene>, and the [http://proteopedia.org/wiki/index.php/Talk:Garman_lab:_Interconversion_of_lysosomal_enzyme_specificities Jmol commands used].
<jmol><jmolButton><text>zoom in</text><script>moveto 1.0 { 752 -659 33 153.48} 738.33 0.0 0.0 {-32.029 70.295 112.187} 53.8932808874789 {0 0 0} 0 0 0 3.0 0.0 0.0;</script></jmolButton></jmol>
<jmol><jmolButton><text>zoom in</text><script>moveto 1.0 { 752 -659 33 153.48} 738.33 0.0 0.0 {-32.029 70.295 112.187} 53.8932808874789 {0 0 0} 0 0 0 3.0 0.0 0.0;</script></jmolButton></jmol>
</StructureSection>
</StructureSection>

Revision as of 13:36, 31 October 2020

The Jmol console may be used to obtain information, and to change the scene currently displayed. This may be useful while viewing a Proteopedia page, or while creating a 3D scene, achieving certain effects not possible with the Scene Authoring Tools alone. You can open the Jmol console via the right-click menu in the Jmol window, or via a dedicated button under the Jmol window in the SAT.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Karsten Theis

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