1cyo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1cyo.jpg|left|200px]]
[[Image:1cyo.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1cyo |SIZE=350|CAPTION= <scene name='initialview01'>1cyo</scene>, resolution 1.5&Aring;
+
The line below this paragraph, containing "STRUCTURE_1cyo", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1cyo| PDB=1cyo | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cyo OCA], [http://www.ebi.ac.uk/pdbsum/1cyo PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cyo RCSB]</span>
+
-
}}
+
'''BOVINE CYTOCHROME B(5)'''
'''BOVINE CYTOCHROME B(5)'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
1CYO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. This structure supersedes the now removed PDB entries 3B5C, 2B5C and 1B5C. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CYO OCA].
+
1CYO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. This structure supersedes the now removed PDB entries and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1b5c 1b5c]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CYO OCA].
==Reference==
==Reference==
Line 27: Line 24:
[[Category: Durley, R C.E.]]
[[Category: Durley, R C.E.]]
[[Category: Mathews, F S.]]
[[Category: Mathews, F S.]]
-
[[Category: electron transport]]
+
[[Category: Electron transport]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 13:14:56 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:31:11 2008''
+

Revision as of 10:14, 2 May 2008

Template:STRUCTURE 1cyo

BOVINE CYTOCHROME B(5)


Overview

The structure of bovine liver cytochrome b(5), a soluble 93-residue proteolytic fragment of a 16 kDa membrane-bound hemoprotein, initially solved at 2.0 A resolution, has been refined at 1.5 A using data collected on a diffractometer. Refinement to 2.0 A resolution used the Hendrickson-Konnert procedure PROLSQ and was then extended to 1.5 A resolution using the program PROFFT. Only residues 3-87 could be identified in the model and these residues together with 93 water molecules gave an agreement factor of R = 0.161 for data in the resolution range 1.5-5 A. The structure was finally refined using the program X-PLOR, which enabled alternate conformers to be modelled for several surface side chains. Residues 1 and 2 at the amino terminus of the protein and residue 88 near the carboxyl terminus could be identified from these electron-density maps. However the remaining disordered carboxy-terminal residues could not successfully be included in the model. A total of 117 solvent molecules were included in the final refinement to give R = 0.164 for the data between 1.5 and 10 A.

About this Structure

1CYO is a Single protein structure of sequence from Bos taurus. This structure supersedes the now removed PDB entries and 1b5c. Full crystallographic information is available from OCA.

Reference

Refinement and structural analysis of bovine cytochrome b5 at 1.5 A resolution., Durley RC, Mathews FS, Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):65-76. PMID:15299727 Page seeded by OCA on Fri May 2 13:14:56 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools