6rcd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
==Octamer Domain 1 Protein A Mycoplasma genitalium==
+
==Octamer C-Domain P140 Mycoplasma genitalium.==
-
<StructureSection load='6rcd' size='340' side='right'caption='[[6rcd]]' scene=''>
+
<StructureSection load='6rcd' size='340' side='right'caption='[[6rcd]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RCD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RCD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6rcd]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33530 Atcc 33530]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RCD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RCD FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rcd OCA], [http://pdbe.org/6rcd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rcd RCSB], [http://www.ebi.ac.uk/pdbsum/6rcd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rcd ProSAT]</span></td></tr>
+
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6rcc|6rcc]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mgpB, MG191 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2097 ATCC 33530])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rcd OCA], [http://pdbe.org/6rcd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rcd RCSB], [http://www.ebi.ac.uk/pdbsum/6rcd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rcd ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The human pathogen Mycoplasma genitalium is responsible for urethritis in men, and for cervicitis and pelvic inflammatory disease in women. The adherence of M. genitalium to host target epithelial cells is mediated through an adhesion complex called Nap, which is essential for infectivity. Nap is a transmembrane dimer of heterodimers of the immunodominant proteins P110 and P140. The M. genitalium genome contains multiple copies of portions that share homology with the extracellular regions of P140 and P110 encoded by the genes mg191 and mg192, respectively. Homologous recombination between the genes and the copies allows the generation of a large diversity of P140 and P110 variants to overcome surveillance by the host immune system. Interestingly, the C-terminal domain (C-domain) of the extracellular region of P140, which is essential for the function of Nap by acting as a flexible stalk anchoring the protein to the mycoplasma membrane, presents a low degree of sequence variability. In the present work, the X-ray crystal structures of two crystal forms of a construct of the P140 C-domain are reported. In both crystal forms, the construct forms a compact octamer with D4 point-group symmetry. The structure of the C-domain determined in this work presents significant differences with respect to the structure of the C-domain found recently in intact P140. The structural plasticity of the C-domain appears to be a possible mechanism that may help in the functioning of the mycoplasma adhesion complex.
 +
 +
Alternative conformation of the C-domain of the P140 protein from Mycoplasma genitalium.,Vizarraga D, Perez-Luque R, Martin J, Fita I, Aparicio D Acta Crystallogr F Struct Biol Commun. 2020 Nov 1;76(Pt 11):508-516. doi:, 10.1107/S2053230X20012297. Epub 2020 Oct 8. PMID:33135669<ref>PMID:33135669</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6rcd" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Atcc 33530]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Aparicio D]]
+
[[Category: Aparicio, D]]
-
[[Category: Fita I]]
+
[[Category: Fita, I]]
-
[[Category: Illanes R]]
+
[[Category: Illanes, R]]
-
[[Category: Perez R]]
+
[[Category: Perez, R]]
-
[[Category: Vizarraga D]]
+
[[Category: Vizarraga, D]]
 +
[[Category: Cell adhesion]]
 +
[[Category: Domain-refolding]]
 +
[[Category: Octamer]]

Revision as of 09:48, 18 November 2020

Octamer C-Domain P140 Mycoplasma genitalium.

PDB ID 6rcd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools