This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2vb1
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='2vb1' size='340' side='right'caption='[[2vb1]], [[Resolution|resolution]] 0.65Å' scene=''> | <StructureSection load='2vb1' size='340' side='right'caption='[[2vb1]], [[Resolution|resolution]] 0.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2vb1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VB1 OCA]. For a <b>guided tour on the structure components</b> use [http:// | + | <table><tr><td colspan='2'>[[2vb1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VB1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2VB1 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1aki|1aki]], [[1azf|1azf]], [[1b2k|1b2k]], [[1bgi|1bgi]], [[1bvx|1bvx]], [[1bwj|1bwj]], [[1c10|1c10]], [[1dpw|1dpw]], [[1dqj|1dqj]], [[1f0w|1f0w]], [[1f10|1f10]], [[1fdl|1fdl]], [[1flq|1flq]], [[1flu|1flu]], [[1flw|1flw]], [[1fn5|1fn5]], [[1g7i|1g7i]], [[1g7l|1g7l]], [[1gwd|1gwd]], [[1gxv|1gxv]], [[1h6m|1h6m]], [[1hc0|1hc0]], [[1hel|1hel]], [[1hen|1hen]], [[1heo|1heo]], [[132l|132l]], [[193l|193l]], [[194l|194l]], [[1a2y|1a2y]], [[1at5|1at5]], [[1at6|1at6]], [[1b0d|1b0d]], [[1bhz|1bhz]], [[1bvk|1bvk]], [[1bwh|1bwh]], [[1bwi|1bwi]], [[1c08|1c08]], [[1dpx|1dpx]], [[1e8l|1e8l]], [[1f3j|1f3j]], [[1fly|1fly]], [[1g7h|1g7h]], [[1g7j|1g7j]], [[1g7m|1g7m]], [[1gpq|1gpq]], [[1gxx|1gxx]], [[1h87|1h87]], [[1hem|1hem]], [[1heq|1heq]], [[1her|1her]], [[1hsw|1hsw]], [[1hep|1hep]], [[1hew|1hew]], [[1hf4|1hf4]], [[1ic4|1ic4]], [[1ic5|1ic5]], [[1ic7|1ic7]], [[1iee|1iee]], [[1io5|1io5]], [[1ioq|1ioq]], [[1ios|1ios]], [[1iot|1iot]], [[1ir7|1ir7]], [[1ir9|1ir9]], [[1j1x|1j1x]], [[1ja2|1ja2]], [[1ja6|1ja6]], [[1jis|1jis]], [[1jit|1jit]], [[1jj0|1jj0]], [[1jj1|1jj1]], [[1jj3|1jj3]], [[1kip|1kip]], [[1kir|1kir]], [[1lcn|1lcn]], [[1hsx|1hsx]], [[1ior|1ior]], [[1ir8|1ir8]], [[1j1o|1j1o]], [[1j1p|1j1p]], [[1ja4|1ja4]], [[1ja7|1ja7]], [[1jiy|1jiy]], [[1jpo|1jpo]], [[1jto|1jto]], [[1jtt|1jtt]], [[1kiq|1kiq]], [[1kxw|1kxw]], [[1kxx|1kxx]], [[1kxy|1kxy]], [[1lj3|1lj3]], [[1lj4|1lj4]], [[1ljf|1ljf]], [[1ljh|1ljh]], [[1ljj|1ljj]], [[1ljk|1ljk]], [[1lkr|1lkr]], [[1lks|1lks]], [[1lpi|1lpi]], [[1lsa|1lsa]], [[1lse|1lse]], [[1lje|1lje]], [[1ljg|1ljg]], [[1lji|1lji]], [[1lma|1lma]], [[1lsb|1lsb]], [[1lsc|1lsc]], [[1lsd|1lsd]], [[1lsf|1lsf]], [[1lsm|1lsm]], [[1lsn|1lsn]], [[1lsy|1lsy]], [[1lys|1lys]], [[1lz9|1lz9]], [[1lzc|1lzc]], [[1lze|1lze]], [[1lzg|1lzg]], [[1lzh|1lzh]], [[1mel|1mel]], [[1n4f|1n4f]], [[1nby|1nby]], [[1ndg|1ndg]], [[1qio|1qio]], [[1ri8|1ri8]], [[1rjc|1rjc]], [[1sf6|1sf6]], [[1sfg|1sfg]], [[1lsg|1lsg]], [[1lsz|1lsz]], [[1lyo|1lyo]], [[1lyz|1lyz]], [[1lz8|1lz8]], [[1lza|1lza]], [[1lzb|1lzb]], [[1lzd|1lzd]], [[1lzn|1lzn]], [[1lzt|1lzt]], [[1mlc|1mlc]], [[1nbz|1nbz]], [[1ndm|1ndm]], [[1p2c|1p2c]], [[1ps5|1ps5]], [[1qtk|1qtk]], [[1rcm|1rcm]], [[1rfp|1rfp]], [[1sf4|1sf4]], [[1sf7|1sf7]], [[1sfb|1sfb]], [[1sq2|1sq2]], [[1t3p|1t3p]], [[1t6v|1t6v]], [[1ua6|1ua6]], [[1uc0|1uc0]], [[1uco|1uco]], [[1uib|1uib]], [[1uif|1uif]], [[1vat|1vat]], [[1vdp|1vdp]], [[1vds|1vds]], [[1vdt|1vdt]], [[1ved|1ved]], [[1vfb|1vfb]], [[1w6z|1w6z]], [[1wtm|1wtm]], [[1wtn|1wtn]], [[1xej|1xej]], [[1xgq|1xgq]], [[1yik|1yik]], [[1ykx|1ykx]], [[1yl0|1yl0]], [[1yqv|1yqv]], [[1zmy|1zmy]], [[2aub|2aub]], [[2bly|2bly]], [[2bpu|2bpu]], [[1uia|1uia]], [[1uic|1uic]], [[1uid|1uid]], [[1uie|1uie]], [[1uig|1uig]], [[1uih|1uih]], [[1uuz|1uuz]], [[1v7s|1v7s]], [[1v7t|1v7t]], [[1vau|1vau]], [[1vdq|1vdq]], [[1xei|1xei]], [[1xek|1xek]], [[1xfp|1xfp]], [[1xgp|1xgp]], [[1yil|1yil]], [[1yky|1yky]], [[1ykz|1ykz]], [[1yl1|1yl1]], [[1z55|1z55]], [[2a6u|2a6u]], [[2a7d|2a7d]], [[2a7f|2a7f]], [[2b5z|2b5z]], [[2blx|2blx]], [[2c8o|2c8o]], [[2c8p|2c8p]], [[2cds|2cds]], [[2d4i|2d4i]], [[2d6b|2d6b]], [[2d91|2d91]], [[2lyo|2lyo]], [[3hfm|3hfm]], [[3lyt|3lyt]], [[3lyz|3lyz]], [[4lyo|4lyo]], [[5lyz|5lyz]], [[6lyt|6lyt]], [[6lyz|6lyz]], [[7lyz|7lyz]], [[8lyz|8lyz]], [[2cgi|2cgi]], [[2d4j|2d4j]], [[2d4k|2d4k]], [[2fbb|2fbb]], [[2hfm|2hfm]], [[2iff|2iff]], [[2lym|2lym]], [[2lyz|2lyz]], [[2lzh|2lzh]], [[2lzt|2lzt]], [[3lym|3lym]], [[3lyo|3lyo]], [[3lzt|3lzt]], [[4lym|4lym]], [[4lyt|4lyt]], [[4lyz|4lyz]], [[4lzt|4lzt]], [[5lym|5lym]], [[5lyt|5lyt]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1aki|1aki]], [[1azf|1azf]], [[1b2k|1b2k]], [[1bgi|1bgi]], [[1bvx|1bvx]], [[1bwj|1bwj]], [[1c10|1c10]], [[1dpw|1dpw]], [[1dqj|1dqj]], [[1f0w|1f0w]], [[1f10|1f10]], [[1fdl|1fdl]], [[1flq|1flq]], [[1flu|1flu]], [[1flw|1flw]], [[1fn5|1fn5]], [[1g7i|1g7i]], [[1g7l|1g7l]], [[1gwd|1gwd]], [[1gxv|1gxv]], [[1h6m|1h6m]], [[1hc0|1hc0]], [[1hel|1hel]], [[1hen|1hen]], [[1heo|1heo]], [[132l|132l]], [[193l|193l]], [[194l|194l]], [[1a2y|1a2y]], [[1at5|1at5]], [[1at6|1at6]], [[1b0d|1b0d]], [[1bhz|1bhz]], [[1bvk|1bvk]], [[1bwh|1bwh]], [[1bwi|1bwi]], [[1c08|1c08]], [[1dpx|1dpx]], [[1e8l|1e8l]], [[1f3j|1f3j]], [[1fly|1fly]], [[1g7h|1g7h]], [[1g7j|1g7j]], [[1g7m|1g7m]], [[1gpq|1gpq]], [[1gxx|1gxx]], [[1h87|1h87]], [[1hem|1hem]], [[1heq|1heq]], [[1her|1her]], [[1hsw|1hsw]], [[1hep|1hep]], [[1hew|1hew]], [[1hf4|1hf4]], [[1ic4|1ic4]], [[1ic5|1ic5]], [[1ic7|1ic7]], [[1iee|1iee]], [[1io5|1io5]], [[1ioq|1ioq]], [[1ios|1ios]], [[1iot|1iot]], [[1ir7|1ir7]], [[1ir9|1ir9]], [[1j1x|1j1x]], [[1ja2|1ja2]], [[1ja6|1ja6]], [[1jis|1jis]], [[1jit|1jit]], [[1jj0|1jj0]], [[1jj1|1jj1]], [[1jj3|1jj3]], [[1kip|1kip]], [[1kir|1kir]], [[1lcn|1lcn]], [[1hsx|1hsx]], [[1ior|1ior]], [[1ir8|1ir8]], [[1j1o|1j1o]], [[1j1p|1j1p]], [[1ja4|1ja4]], [[1ja7|1ja7]], [[1jiy|1jiy]], [[1jpo|1jpo]], [[1jto|1jto]], [[1jtt|1jtt]], [[1kiq|1kiq]], [[1kxw|1kxw]], [[1kxx|1kxx]], [[1kxy|1kxy]], [[1lj3|1lj3]], [[1lj4|1lj4]], [[1ljf|1ljf]], [[1ljh|1ljh]], [[1ljj|1ljj]], [[1ljk|1ljk]], [[1lkr|1lkr]], [[1lks|1lks]], [[1lpi|1lpi]], [[1lsa|1lsa]], [[1lse|1lse]], [[1lje|1lje]], [[1ljg|1ljg]], [[1lji|1lji]], [[1lma|1lma]], [[1lsb|1lsb]], [[1lsc|1lsc]], [[1lsd|1lsd]], [[1lsf|1lsf]], [[1lsm|1lsm]], [[1lsn|1lsn]], [[1lsy|1lsy]], [[1lys|1lys]], [[1lz9|1lz9]], [[1lzc|1lzc]], [[1lze|1lze]], [[1lzg|1lzg]], [[1lzh|1lzh]], [[1mel|1mel]], [[1n4f|1n4f]], [[1nby|1nby]], [[1ndg|1ndg]], [[1qio|1qio]], [[1ri8|1ri8]], [[1rjc|1rjc]], [[1sf6|1sf6]], [[1sfg|1sfg]], [[1lsg|1lsg]], [[1lsz|1lsz]], [[1lyo|1lyo]], [[1lyz|1lyz]], [[1lz8|1lz8]], [[1lza|1lza]], [[1lzb|1lzb]], [[1lzd|1lzd]], [[1lzn|1lzn]], [[1lzt|1lzt]], [[1mlc|1mlc]], [[1nbz|1nbz]], [[1ndm|1ndm]], [[1p2c|1p2c]], [[1ps5|1ps5]], [[1qtk|1qtk]], [[1rcm|1rcm]], [[1rfp|1rfp]], [[1sf4|1sf4]], [[1sf7|1sf7]], [[1sfb|1sfb]], [[1sq2|1sq2]], [[1t3p|1t3p]], [[1t6v|1t6v]], [[1ua6|1ua6]], [[1uc0|1uc0]], [[1uco|1uco]], [[1uib|1uib]], [[1uif|1uif]], [[1vat|1vat]], [[1vdp|1vdp]], [[1vds|1vds]], [[1vdt|1vdt]], [[1ved|1ved]], [[1vfb|1vfb]], [[1w6z|1w6z]], [[1wtm|1wtm]], [[1wtn|1wtn]], [[1xej|1xej]], [[1xgq|1xgq]], [[1yik|1yik]], [[1ykx|1ykx]], [[1yl0|1yl0]], [[1yqv|1yqv]], [[1zmy|1zmy]], [[2aub|2aub]], [[2bly|2bly]], [[2bpu|2bpu]], [[1uia|1uia]], [[1uic|1uic]], [[1uid|1uid]], [[1uie|1uie]], [[1uig|1uig]], [[1uih|1uih]], [[1uuz|1uuz]], [[1v7s|1v7s]], [[1v7t|1v7t]], [[1vau|1vau]], [[1vdq|1vdq]], [[1xei|1xei]], [[1xek|1xek]], [[1xfp|1xfp]], [[1xgp|1xgp]], [[1yil|1yil]], [[1yky|1yky]], [[1ykz|1ykz]], [[1yl1|1yl1]], [[1z55|1z55]], [[2a6u|2a6u]], [[2a7d|2a7d]], [[2a7f|2a7f]], [[2b5z|2b5z]], [[2blx|2blx]], [[2c8o|2c8o]], [[2c8p|2c8p]], [[2cds|2cds]], [[2d4i|2d4i]], [[2d6b|2d6b]], [[2d91|2d91]], [[2lyo|2lyo]], [[3hfm|3hfm]], [[3lyt|3lyt]], [[3lyz|3lyz]], [[4lyo|4lyo]], [[5lyz|5lyz]], [[6lyt|6lyt]], [[6lyz|6lyz]], [[7lyz|7lyz]], [[8lyz|8lyz]], [[2cgi|2cgi]], [[2d4j|2d4j]], [[2d4k|2d4k]], [[2fbb|2fbb]], [[2hfm|2hfm]], [[2iff|2iff]], [[2lym|2lym]], [[2lyz|2lyz]], [[2lzh|2lzh]], [[2lzt|2lzt]], [[3lym|3lym]], [[3lyo|3lyo]], [[3lzt|3lzt]], [[4lym|4lym]], [[4lyt|4lyt]], [[4lyz|4lyz]], [[4lzt|4lzt]], [[5lym|5lym]], [[5lyt|5lyt]]</div></td></tr> |
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http:// | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2vb1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vb1 OCA], [http://pdbe.org/2vb1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vb1 RCSB], [http://www.ebi.ac.uk/pdbsum/2vb1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vb1 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
Revision as of 21:25, 18 November 2020
HEWL at 0.65 angstrom resolution
| |||||||||||

