T-cell receptor 3D structures
From Proteopedia
(Difference between revisions)
(New page: == 3D structures of T-cell receptor== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *TCR α chain **4udt –...) |
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*TCR α+β chains | *TCR α+β chains | ||
- | **[[1kgc]], [[2nw2]], [[2vlm]], [[3dx9]], [[3mff]], [[3qeu]], [[3skn]], [[4dzb]], [[4e42]], [[4jfh]], [[4g8f]], [[4g8e]], [[4ww1]], [[4x6b]], [[4zdh]], [[6eh4]], [[6eh5]], [[6eh6]], [[6eh7]], [[6eh8]], [[6eh9]], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6fra]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fuo]], [[6fup]], [[6fuq]], [[6fur]], [[6at6]], [[6fr3]], [[6fr4]], [[6fr5]], [[6ovo]], [[6cuh]], [[6cph]], [[5nmd]] – hTCR α+β chains<br /> | + | **[[1kgc]], [[2nw2]], [[2vlm]], [[3dx9]], [[3mff]], [[3qeu]], [[3skn]], [[4dzb]], [[4e42]], [[4jfh]], [[4g8f]], [[4g8e]], [[4ww1]], [[4x6b]], [[4zdh]], [[6eh4]], [[6eh5]], [[6eh6]], [[6eh7]], [[6eh8]], [[6eh9]], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6fra]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fuo]], [[6fup]], [[6fuq]], [[6fur]], [[6at6]], [[6fr3]], [[6fr4]], [[6fr5]], [[6ovo]], [[6cuh]], [[6cph]], [[5nmd]], [[6u07]], [[6vtc]], [[6vth]], [[6fr3]] – hTCR α+β chains<br /> |
**[[4ei6]] – h/mTCR α+β chains <br /> | **[[4ei6]] – h/mTCR α+β chains <br /> | ||
**[[2ial]], [[4gg8]], [[4onh]] – hTCR α+β chains (mutant)<br /> | **[[2ial]], [[4gg8]], [[4onh]] – hTCR α+β chains (mutant)<br /> | ||
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**[[2xna]], [[5fk9]], [[5fka]] – hTCR α+β chains + enterotoxin <br /> | **[[2xna]], [[5fk9]], [[5fka]] – hTCR α+β chains + enterotoxin <br /> | ||
+ | **[[6fra], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fup]], [[6fuo]] [[6fuq]], [[6fur]], [[4eh4]], [[6eh9]], [[6eh8]], [[6eh7]], [[4eh5]], [[6eh6]] – hTCR α+β chains + polypeptide <br /> | ||
**[[5tl5]], [[5tlj]], [[5tlk]] – h/mTCR α+β chains + CD27 antigen <br /> | **[[5tl5]], [[5tlj]], [[5tlk]] – h/mTCR α+β chains + CD27 antigen <br /> | ||
**[[1nfd]], [[1kb5]] – mTCR α+β chains + FAB fragment<br /> | **[[1nfd]], [[1kb5]] – mTCR α+β chains + FAB fragment<br /> | ||
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*TCR complex with MHC and antigen | *TCR complex with MHC and antigen | ||
- | **[[1ao7]], [[1bd2]], [[1qrn]], [[1qse]], [[1qsf]], [[1mi5]], [[1oga]], [[1lp9]], [[2bnq]], [[2bnr]], [[2bnu]], [[2ak4]], [[2esv]], [[2f53]], [[2f54]], [[2gj6]], [[2nx5]], [[2p5e]], [[2p5w]], [[2pye]], [[2pyf]], [[3dxa]], [[3hg1]], [[3gsn]], [[3kpr]], [[3kps]], [[3kxf]], [[3o4l]], [[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3sjv]], [[2ypl]], [[4jff]], [[4jfe]], [[4jfd]], [[4jry]], [[4jrx]], [[2jcc]], [[3d39]], [[3d3v]], [[4mji]], [[4prh]], [[4pri]], [[4prp]], [[5brz]], [[5bs0]], [[5c07]], [[5c08]], [[5c09]], [[5c0a]], [[5c0b]], [[5c0c]], [[5e6i]], [[5eu6]], [[5hhm]], [[5hho]], [[5hyj]], [[5ivx]], [[5ks9]], [[5ksa]], [[5ksb]], [[5m01]], [[5w1v]], [[5w1w]], [[5wkf]], [[5wkh]], [[ | + | **[[1ao7]], [[1bd2]], [[1qrn]], [[1qse]], [[1qsf]], [[1mi5]], [[1oga]], [[1lp9]], [[2bnq]], [[2bnr]], [[2bnu]], [[2ak4]], [[2esv]], [[2f53]], [[2f54]], [[2gj6]], [[2nx5]], [[2p5e]], [[2p5w]], [[2pye]], [[2pyf]], [[3dxa]], [[3hg1]], [[3gsn]], [[3kpr]], [[3kps]], [[3kxf]], [[3o4l]], [[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3sjv]], [[2ypl]], [[4jff]], [[4jfe]], [[4jfd]], [[4jry]], [[4jrx]], [[2jcc]], [[3d39]], [[3d3v]], [[4mji]], [[4prh]], [[4pri]], [[4prp]], [[5brz]], [[5bs0]], [[5c07]], [[5c08]], [[5c09]], [[5c0a]], [[5c0b]], [[5c0c]], [[5e6i]], [[5eu6]], [[5hhm]], [[5hho]], [[5hyj]], [[5ivx]], [[5ks9]], [[5ksa]], [[5ksb]], [[5m01]], [[5w1v]], [[5w1w]], [[5wkf]], [[5wkh]], [[6at6]], [[6avf]], [[6avg]], [[6bj2]], [[6bj3]], [[6bj8]], [[4nqc]], [[4nqd]], [[4nqe]], [[6rpb]], [[6rpa]], [[6rp9]], [[6q3s]], [[6dkp]], [[5yxu]], [[5yxn]], [[5nqk]], [[5nmg]], [[5nmf]], [[5nme]], [[5nht]], [[6l9l]], [[6dkp]], [[6q3s]], [[6tro]], [[6rpa]], [[6r2l]] – hTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br /> |
**[[1fyt]], [[1ymm]], [[1zgl]], [[4e41]], [[4z7u]], [[4z7v]], [[4z7w]], [[6u3o]], [[6u3n]], [[6py2]], [[6px6]], [[6cqr]], [[6cqq]], [[6cqn]], [[6cql]] – hTCR α+β chains + MHC + polypeptide <br /> | **[[1fyt]], [[1ymm]], [[1zgl]], [[4e41]], [[4z7u]], [[4z7v]], [[4z7w]], [[6u3o]], [[6u3n]], [[6py2]], [[6px6]], [[6cqr]], [[6cqq]], [[6cqn]], [[6cql]] – hTCR α+β chains + MHC + polypeptide <br /> | ||
**[[4ozf]], [[4ozg]], [[4ozh]], [[4ozi]], [2iam]], [[2ian]], [[1j8h]], [[4gg6]] – hTCR α+β chains (mutant) + MHC + polypeptide <br /> | **[[4ozf]], [[4ozg]], [[4ozh]], [[4ozi]], [2iam]], [[2ian]], [[1j8h]], [[4gg6]] – hTCR α+β chains (mutant) + MHC + polypeptide <br /> | ||
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**[[1ypz]], [[6mwr]] – hTCR γ+δ chains + MHC + β-2 microglobulin <br /> | **[[1ypz]], [[6mwr]] – hTCR γ+δ chains + MHC + β-2 microglobulin <br /> | ||
**[[4l4t]], [[4l4v]], [[4l8s]], [[4l9l]], [[4lcc]], [[4lcw]], [[5u1r]], [[5u2v]], [[5u6q]], [[5u72]] – hTCR MAIT α+β chains + MHC + β-2 microglobulin <br /> | **[[4l4t]], [[4l4v]], [[4l8s]], [[4l9l]], [[4lcc]], [[4lcw]], [[5u1r]], [[5u2v]], [[5u6q]], [[5u72]] – hTCR MAIT α+β chains + MHC + β-2 microglobulin <br /> | ||
- | **[[2ckb]], [[1fo0]], [[1g6r]], [[1kj2]], [[1mwa]], [[1nam]], [[2ol3]], [[2j8u]], [[5til]], [[5tje]] – mTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br /> | + | **[[2ckb]], [[1fo0]], [[1g6r]], [[1kj2]], [[1mwa]], [[1nam]], [[2ol3]], [[2j8u]], [[5til]], [[5tje]], [[6g9q]] – mTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br /> |
**[[2pxy]] – mTCR α+β chains (mutant) + MHC + β-2 microglobulin + polypeptide <br /> | **[[2pxy]] – mTCR α+β chains (mutant) + MHC + β-2 microglobulin + polypeptide <br /> | ||
**[[4p2o]], [[4p2q]], [[4p2r]], [[4p46]] – mTCR α+β chains + MHC + polypeptide <br /> | **[[4p2o]], [[4p2q]], [[4p2r]], [[4p46]] – mTCR α+β chains + MHC + polypeptide <br /> | ||
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**[[3huj]], [[3vwj]], [[3vwk]], [[4en3]], [[4ww2]], [[4wwk]] – hTCR NKT α+β chains + β-2 microglobulin + CD1D <br /> | **[[3huj]], [[3vwj]], [[3vwk]], [[4en3]], [[4ww2]], [[4wwk]] – hTCR NKT α+β chains + β-2 microglobulin + CD1D <br /> | ||
**[[3tzv]] – hTCR NKT α+β chains (mutant) + β-2 microglobulin + CD1D <br /> | **[[3tzv]] – hTCR NKT α+β chains (mutant) + β-2 microglobulin + CD1D <br /> | ||
- | **[[3o8x]], [[3o9w]], [[4ei5]], [[4y16]], [[4y2d]], [[4y4h]], [[4y4k]], [[4y4f]], [[4zak]] | + | **[[3o8x]], [[3o9w]], [[4ei5]], [[4y16]], [[4y2d]], [[4y4h]], [[4y4k]], [[4y4f]], [[4zak]], [[6miv]], [[6mjq], [[6mja]], [[6mji]], [[6mjj]], [[6mj4]], [[6mj6]], [[6miy]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D <br /> |
**[[3scm]], [[3sda]], [[3sdc]], [[3sdd]], [[3sdx]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D + ceramide derivative<br /> | **[[3scm]], [[3sda]], [[3sdc]], [[3sdd]], [[3sdx]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D + ceramide derivative<br /> | ||
**[[3t0e]] – hTCR α+β chains + MHC + CD4 <br /> | **[[3t0e]] – hTCR α+β chains + MHC + CD4 <br /> | ||
**[[6cxa]], [[6cx9]], [[6cx7]], [[6cx5]], [[6cwe]], [[6cwb]], [[6cw9]], [[6cw6]], [[5wlg]], [[5m02]] – mTCR α+β chains + β-2 microglobulin + CD1D1 <br /> | **[[6cxa]], [[6cx9]], [[6cx7]], [[6cx5]], [[6cwe]], [[6cwb]], [[6cw9]], [[6cw6]], [[5wlg]], [[5m02]] – mTCR α+β chains + β-2 microglobulin + CD1D1 <br /> | ||
+ | **[[6jxr]] – hTCR α+β+γ chains + CD3 – Cryo EM <br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] |
Revision as of 07:56, 22 November 2020
3D structures of T-cell receptor
Updated on 22-November-2020 {{#tree:id=OrganizedByTopic|openlevels=0|
- TCR α chain
- TCR β chain
- TCR β chain + antigen
- TCR δ chain
- 1tvd – hTCR δ chain variable domain
- 1tvd – hTCR δ chain variable domain
- TCR α+β chains
- 1kgc, 2nw2, 2vlm, 3dx9, 3mff, 3qeu, 3skn, 4dzb, 4e42, 4jfh, 4g8f, 4g8e, 4ww1, 4x6b, 4zdh, 6eh4, 6eh5, 6eh6, 6eh7, 6eh8, 6eh9, 6fr6, 6fr7, 6fr8, 6fr9, 6fra, 6frb, 6frc, 6fum, 6fun, 6fuo, 6fup, 6fuq, 6fur, 6at6, 6fr3, 6fr4, 6fr5, 6ovo, 6cuh, 6cph, 5nmd, 6u07, 6vtc, 6vth, 6fr3 – hTCR α+β chains
- 4ei6 – h/mTCR α+β chains
- 2ial, 4gg8, 4onh – hTCR α+β chains (mutant)
- 3of6 – hTCR pre-α+β (mutant) chains
- 1tcr, 2z35, 2p1y – mTCR α+β chains
- 1tcr, 2q86, 5iw1– mTCR α+β chains (mutant)
- 1bwm – mTCR α+β chains variable domains (mutant) - NMR
- 1kgc, 2nw2, 2vlm, 3dx9, 3mff, 3qeu, 3skn, 4dzb, 4e42, 4jfh, 4g8f, 4g8e, 4ww1, 4x6b, 4zdh, 6eh4, 6eh5, 6eh6, 6eh7, 6eh8, 6eh9, 6fr6, 6fr7, 6fr8, 6fr9, 6fra, 6frb, 6frc, 6fum, 6fun, 6fuo, 6fup, 6fuq, 6fur, 6at6, 6fr3, 6fr4, 6fr5, 6ovo, 6cuh, 6cph, 5nmd, 6u07, 6vtc, 6vth, 6fr3 – hTCR α+β chains
- TCR α+β+γ chains
- 4mnh – hTCR α+β+γ chains
- 4mnh – hTCR α+β+γ chains
- TCR γ+δ chains
- TCR complex with antigen
- TCR complex with MHC and antigen
- 1ao7, 1bd2, 1qrn, 1qse, 1qsf, 1mi5, 1oga, 1lp9, 2bnq, 2bnr, 2bnu, 2ak4, 2esv, 2f53, 2f54, 2gj6, 2nx5, 2p5e, 2p5w, 2pye, 2pyf, 3dxa, 3hg1, 3gsn, 3kpr, 3kps, 3kxf, 3o4l, 3qdg, 3qdj, 3qdm, 3qeq, 3sjv, 2ypl, 4jff, 4jfe, 4jfd, 4jry, 4jrx, 2jcc, 3d39, 3d3v, 4mji, 4prh, 4pri, 4prp, 5brz, 5bs0, 5c07, 5c08, 5c09, 5c0a, 5c0b, 5c0c, 5e6i, 5eu6, 5hhm, 5hho, 5hyj, 5ivx, 5ks9, 5ksa, 5ksb, 5m01, 5w1v, 5w1w, 5wkf, 5wkh, 6at6, 6avf, 6avg, 6bj2, 6bj3, 6bj8, 4nqc, 4nqd, 4nqe, 6rpb, 6rpa, 6rp9, 6q3s, 6dkp, 5yxu, 5yxn, 5nqk, 5nmg, 5nmf, 5nme, 5nht, 6l9l, 6dkp, 6q3s, 6tro, 6rpa, 6r2l – hTCR α+β chains + MHC + β-2 microglobulin + polypeptide
- 1fyt, 1ymm, 1zgl, 4e41, 4z7u, 4z7v, 4z7w, 6u3o, 6u3n, 6py2, 6px6, 6cqr, 6cqq, 6cqn, 6cql – hTCR α+β chains + MHC + polypeptide
- 4ozf, 4ozg, 4ozh, 4ozi, [2iam]], 2ian, 1j8h, 4gg6 – hTCR α+β chains (mutant) + MHC + polypeptide
- 3o6f, 5u16, 5u17 – hTCR α+β chains + MHC
- 3pl6 – hTCR α chain + MHC + polypeptide
- 2xn9, 4c56 – hTCR α+β chains + MHC + polypeptide + enterotoxin
- 5xot – hTCR δ+β chains + MHC + β-2 microglobulin + polypeptide
- 1ypz, 6mwr – hTCR γ+δ chains + MHC + β-2 microglobulin
- 4l4t, 4l4v, 4l8s, 4l9l, 4lcc, 4lcw, 5u1r, 5u2v, 5u6q, 5u72 – hTCR MAIT α+β chains + MHC + β-2 microglobulin
- 2ckb, 1fo0, 1g6r, 1kj2, 1mwa, 1nam, 2ol3, 2j8u, 5til, 5tje, 6g9q – mTCR α+β chains + MHC + β-2 microglobulin + polypeptide
- 2pxy – mTCR α+β chains (mutant) + MHC + β-2 microglobulin + polypeptide
- 4p2o, 4p2q, 4p2r, 4p46 – mTCR α+β chains + MHC + polypeptide
- 1u3h – mTCR α+β chains (mutant) + MHC + polypeptide
- 2icw – mTCR α+β chains + MHC + mycoplasma arthritidis mitogen + polypeptide
- 1d9k, 2e7l, 2oi9, 2z31, 3e2h, 3e3q, 3qib, 3mbe, 6bga – mTCR α+β chains + MHC + polypeptide
- 1ao7, 1bd2, 1qrn, 1qse, 1qsf, 1mi5, 1oga, 1lp9, 2bnq, 2bnr, 2bnu, 2ak4, 2esv, 2f53, 2f54, 2gj6, 2nx5, 2p5e, 2p5w, 2pye, 2pyf, 3dxa, 3hg1, 3gsn, 3kpr, 3kps, 3kxf, 3o4l, 3qdg, 3qdj, 3qdm, 3qeq, 3sjv, 2ypl, 4jff, 4jfe, 4jfd, 4jry, 4jrx, 2jcc, 3d39, 3d3v, 4mji, 4prh, 4pri, 4prp, 5brz, 5bs0, 5c07, 5c08, 5c09, 5c0a, 5c0b, 5c0c, 5e6i, 5eu6, 5hhm, 5hho, 5hyj, 5ivx, 5ks9, 5ksa, 5ksb, 5m01, 5w1v, 5w1w, 5wkf, 5wkh, 6at6, 6avf, 6avg, 6bj2, 6bj3, 6bj8, 4nqc, 4nqd, 4nqe, 6rpb, 6rpa, 6rp9, 6q3s, 6dkp, 5yxu, 5yxn, 5nqk, 5nmg, 5nmf, 5nme, 5nht, 6l9l, 6dkp, 6q3s, 6tro, 6rpa, 6r2l – hTCR α+β chains + MHC + β-2 microglobulin + polypeptide
- TCR complex with CD
- 4x6c, 4x6d – hTCR α+β chains + β-2 microglobulin + CD1A
- 5wki, 6cug – hTCR α+β chains + β-2 microglobulin + CD1B
- 6c09 – hTCR α+β chains + β-2 microglobulin + CD1C
- 3huj, 3vwj, 3vwk, 4en3, 4ww2, 4wwk – hTCR NKT α+β chains + β-2 microglobulin + CD1D
- 3tzv – hTCR NKT α+β chains (mutant) + β-2 microglobulin + CD1D
- 3o8x, 3o9w, 4ei5, 4y16, 4y2d, 4y4h, 4y4k, 4y4f, 4zak, 6miv, [[6mjq], 6mja, 6mji, 6mjj, 6mj4, 6mj6, 6miy – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D
- 3scm, 3sda, 3sdc, 3sdd, 3sdx – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D + ceramide derivative
- 3t0e – hTCR α+β chains + MHC + CD4
- 6cxa, 6cx9, 6cx7, 6cx5, 6cwe, 6cwb, 6cw9, 6cw6, 5wlg, 5m02 – mTCR α+β chains + β-2 microglobulin + CD1D1
- 6jxr – hTCR α+β+γ chains + CD3 – Cryo EM
- 4x6c, 4x6d – hTCR α+β chains + β-2 microglobulin + CD1A
}}