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T-cell receptor 3D structures

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(New page: == 3D structures of T-cell receptor== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *TCR α chain **4udt –...)
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*TCR α+β chains
*TCR α+β chains
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**[[1kgc]], [[2nw2]], [[2vlm]], [[3dx9]], [[3mff]], [[3qeu]], [[3skn]], [[4dzb]], [[4e42]], [[4jfh]], [[4g8f]], [[4g8e]], [[4ww1]], [[4x6b]], [[4zdh]], [[6eh4]], [[6eh5]], [[6eh6]], [[6eh7]], [[6eh8]], [[6eh9]], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6fra]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fuo]], [[6fup]], [[6fuq]], [[6fur]], [[6at6]], [[6fr3]], [[6fr4]], [[6fr5]], [[6ovo]], [[6cuh]], [[6cph]], [[5nmd]] – hTCR α+β chains<br />
+
**[[1kgc]], [[2nw2]], [[2vlm]], [[3dx9]], [[3mff]], [[3qeu]], [[3skn]], [[4dzb]], [[4e42]], [[4jfh]], [[4g8f]], [[4g8e]], [[4ww1]], [[4x6b]], [[4zdh]], [[6eh4]], [[6eh5]], [[6eh6]], [[6eh7]], [[6eh8]], [[6eh9]], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6fra]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fuo]], [[6fup]], [[6fuq]], [[6fur]], [[6at6]], [[6fr3]], [[6fr4]], [[6fr5]], [[6ovo]], [[6cuh]], [[6cph]], [[5nmd]], [[6u07]], [[6vtc]], [[6vth]], [[6fr3]] – hTCR α+β chains<br />
**[[4ei6]] – h/mTCR α+β chains <br />
**[[4ei6]] – h/mTCR α+β chains <br />
**[[2ial]], [[4gg8]], [[4onh]] – hTCR α+β chains (mutant)<br />
**[[2ial]], [[4gg8]], [[4onh]] – hTCR α+β chains (mutant)<br />
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**[[2xna]], [[5fk9]], [[5fka]] – hTCR α+β chains + enterotoxin <br />
**[[2xna]], [[5fk9]], [[5fka]] – hTCR α+β chains + enterotoxin <br />
 +
**[[6fra], [[6fr6]], [[6fr7]], [[6fr8]], [[6fr9]], [[6frb]], [[6frc]], [[6fum]], [[6fun]], [[6fup]], [[6fuo]] [[6fuq]], [[6fur]], [[4eh4]], [[6eh9]], [[6eh8]], [[6eh7]], [[4eh5]], [[6eh6]] – hTCR α+β chains + polypeptide <br />
**[[5tl5]], [[5tlj]], [[5tlk]] – h/mTCR α+β chains + CD27 antigen <br />
**[[5tl5]], [[5tlj]], [[5tlk]] – h/mTCR α+β chains + CD27 antigen <br />
**[[1nfd]], [[1kb5]] – mTCR α+β chains + FAB fragment<br />
**[[1nfd]], [[1kb5]] – mTCR α+β chains + FAB fragment<br />
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*TCR complex with MHC and antigen
*TCR complex with MHC and antigen
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**[[1ao7]], [[1bd2]], [[1qrn]], [[1qse]], [[1qsf]], [[1mi5]], [[1oga]], [[1lp9]], [[2bnq]], [[2bnr]], [[2bnu]], [[2ak4]], [[2esv]], [[2f53]], [[2f54]], [[2gj6]], [[2nx5]], [[2p5e]], [[2p5w]], [[2pye]], [[2pyf]], [[3dxa]], [[3hg1]], [[3gsn]], [[3kpr]], [[3kps]], [[3kxf]], [[3o4l]], [[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3sjv]], [[2ypl]], [[4jff]], [[4jfe]], [[4jfd]], [[4jry]], [[4jrx]], [[2jcc]], [[3d39]], [[3d3v]], [[4mji]], [[4prh]], [[4pri]], [[4prp]], [[5brz]], [[5bs0]], [[5c07]], [[5c08]], [[5c09]], [[5c0a]], [[5c0b]], [[5c0c]], [[5e6i]], [[5eu6]], [[5hhm]], [[5hho]], [[5hyj]], [[5ivx]], [[5ks9]], [[5ksa]], [[5ksb]], [[5m01]], [[5w1v]], [[5w1w]], [[5wkf]], [[5wkh]], [[6at5]], [[6avf]], [[6avg]], [[6bj2]], [[6bj3]], [[6bj8]], [[4nqc]], [[4nqd]], [[4nqe]], [[6rpb]], [[6rpa]], [[6rp9]], [[6q3s]], [[6dkp]], [[5yxu]], [[5yxn]], [[5nqk]], [[5nmg]], [[5nmf]], [[5nme]], [[5nht]] – hTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br />
+
**[[1ao7]], [[1bd2]], [[1qrn]], [[1qse]], [[1qsf]], [[1mi5]], [[1oga]], [[1lp9]], [[2bnq]], [[2bnr]], [[2bnu]], [[2ak4]], [[2esv]], [[2f53]], [[2f54]], [[2gj6]], [[2nx5]], [[2p5e]], [[2p5w]], [[2pye]], [[2pyf]], [[3dxa]], [[3hg1]], [[3gsn]], [[3kpr]], [[3kps]], [[3kxf]], [[3o4l]], [[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3sjv]], [[2ypl]], [[4jff]], [[4jfe]], [[4jfd]], [[4jry]], [[4jrx]], [[2jcc]], [[3d39]], [[3d3v]], [[4mji]], [[4prh]], [[4pri]], [[4prp]], [[5brz]], [[5bs0]], [[5c07]], [[5c08]], [[5c09]], [[5c0a]], [[5c0b]], [[5c0c]], [[5e6i]], [[5eu6]], [[5hhm]], [[5hho]], [[5hyj]], [[5ivx]], [[5ks9]], [[5ksa]], [[5ksb]], [[5m01]], [[5w1v]], [[5w1w]], [[5wkf]], [[5wkh]], [[6at6]], [[6avf]], [[6avg]], [[6bj2]], [[6bj3]], [[6bj8]], [[4nqc]], [[4nqd]], [[4nqe]], [[6rpb]], [[6rpa]], [[6rp9]], [[6q3s]], [[6dkp]], [[5yxu]], [[5yxn]], [[5nqk]], [[5nmg]], [[5nmf]], [[5nme]], [[5nht]], [[6l9l]], [[6dkp]], [[6q3s]], [[6tro]], [[6rpa]], [[6r2l]] – hTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br />
**[[1fyt]], [[1ymm]], [[1zgl]], [[4e41]], [[4z7u]], [[4z7v]], [[4z7w]], [[6u3o]], [[6u3n]], [[6py2]], [[6px6]], [[6cqr]], [[6cqq]], [[6cqn]], [[6cql]] – hTCR α+β chains + MHC + polypeptide <br />
**[[1fyt]], [[1ymm]], [[1zgl]], [[4e41]], [[4z7u]], [[4z7v]], [[4z7w]], [[6u3o]], [[6u3n]], [[6py2]], [[6px6]], [[6cqr]], [[6cqq]], [[6cqn]], [[6cql]] – hTCR α+β chains + MHC + polypeptide <br />
**[[4ozf]], [[4ozg]], [[4ozh]], [[4ozi]], [2iam]], [[2ian]], [[1j8h]], [[4gg6]] – hTCR α+β chains (mutant) + MHC + polypeptide <br />
**[[4ozf]], [[4ozg]], [[4ozh]], [[4ozi]], [2iam]], [[2ian]], [[1j8h]], [[4gg6]] – hTCR α+β chains (mutant) + MHC + polypeptide <br />
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**[[1ypz]], [[6mwr]] – hTCR γ+δ chains + MHC + β-2 microglobulin <br />
**[[1ypz]], [[6mwr]] – hTCR γ+δ chains + MHC + β-2 microglobulin <br />
**[[4l4t]], [[4l4v]], [[4l8s]], [[4l9l]], [[4lcc]], [[4lcw]], [[5u1r]], [[5u2v]], [[5u6q]], [[5u72]] – hTCR MAIT α+β chains + MHC + β-2 microglobulin <br />
**[[4l4t]], [[4l4v]], [[4l8s]], [[4l9l]], [[4lcc]], [[4lcw]], [[5u1r]], [[5u2v]], [[5u6q]], [[5u72]] – hTCR MAIT α+β chains + MHC + β-2 microglobulin <br />
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**[[2ckb]], [[1fo0]], [[1g6r]], [[1kj2]], [[1mwa]], [[1nam]], [[2ol3]], [[2j8u]], [[5til]], [[5tje]] – mTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br />
+
**[[2ckb]], [[1fo0]], [[1g6r]], [[1kj2]], [[1mwa]], [[1nam]], [[2ol3]], [[2j8u]], [[5til]], [[5tje]], [[6g9q]] – mTCR α+β chains + MHC + β-2 microglobulin + polypeptide <br />
**[[2pxy]] – mTCR α+β chains (mutant) + MHC + β-2 microglobulin + polypeptide <br />
**[[2pxy]] – mTCR α+β chains (mutant) + MHC + β-2 microglobulin + polypeptide <br />
**[[4p2o]], [[4p2q]], [[4p2r]], [[4p46]] – mTCR α+β chains + MHC + polypeptide <br />
**[[4p2o]], [[4p2q]], [[4p2r]], [[4p46]] – mTCR α+β chains + MHC + polypeptide <br />
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**[[3huj]], [[3vwj]], [[3vwk]], [[4en3]], [[4ww2]], [[4wwk]] – hTCR NKT α+β chains + β-2 microglobulin + CD1D <br />
**[[3huj]], [[3vwj]], [[3vwk]], [[4en3]], [[4ww2]], [[4wwk]] – hTCR NKT α+β chains + β-2 microglobulin + CD1D <br />
**[[3tzv]] – hTCR NKT α+β chains (mutant) + β-2 microglobulin + CD1D <br />
**[[3tzv]] – hTCR NKT α+β chains (mutant) + β-2 microglobulin + CD1D <br />
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**[[3o8x]], [[3o9w]], [[4ei5]], [[4y16]], [[4y2d]], [[4y4h]], [[4y4k]], [[4y4f]], [[4zak]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D <br />
+
**[[3o8x]], [[3o9w]], [[4ei5]], [[4y16]], [[4y2d]], [[4y4h]], [[4y4k]], [[4y4f]], [[4zak]], [[6miv]], [[6mjq], [[6mja]], [[6mji]], [[6mjj]], [[6mj4]], [[6mj6]], [[6miy]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D <br />
**[[3scm]], [[3sda]], [[3sdc]], [[3sdd]], [[3sdx]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D + ceramide derivative<br />
**[[3scm]], [[3sda]], [[3sdc]], [[3sdd]], [[3sdx]] – h/mTCR NKT α+β chains + β-2 microglobulin + CD1D + ceramide derivative<br />
**[[3t0e]] – hTCR α+β chains + MHC + CD4 <br />
**[[3t0e]] – hTCR α+β chains + MHC + CD4 <br />
**[[6cxa]], [[6cx9]], [[6cx7]], [[6cx5]], [[6cwe]], [[6cwb]], [[6cw9]], [[6cw6]], [[5wlg]], [[5m02]] – mTCR α+β chains + β-2 microglobulin + CD1D1 <br />
**[[6cxa]], [[6cx9]], [[6cx7]], [[6cx5]], [[6cwe]], [[6cwb]], [[6cw9]], [[6cw6]], [[5wlg]], [[5m02]] – mTCR α+β chains + β-2 microglobulin + CD1D1 <br />
 +
**[[6jxr]] – hTCR α+β+γ chains + CD3 – Cryo EM <br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:56, 22 November 2020

3D structures of T-cell receptor

Updated on 22-November-2020 {{#tree:id=OrganizedByTopic|openlevels=0|

  • TCR α chain
    • 4udt – hTCR α chain variable domain + TRBV7-9 - human
    • 4udu – hTCR α chain variable domain + TRBV7-9 + enterotoxin type E
    • 1ac6, 1b88, 1h5b, 1i9e – mTCR α chain variable domain - mouse
    • 6mf8 – mTCR α chain transmembrane domain - NMR
  • TCR β chain
  • TCR β chain + antigen
  • TCR δ chain
    • 1tvd – hTCR δ chain variable domain
  • TCR α+β chains
  • TCR α+β+γ chains
    • 4mnh – hTCR α+β+γ chains
  • TCR γ+δ chains
    • 1hxm, 3omz – hTCR γ+δ chains
    • 4ndm – hTCR γ+δ chains (mutant)
  • TCR complex with antigen
  • TCR complex with MHC and antigen
  • TCR complex with CD

}}

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky

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