Hypoxia-Inducible Factors

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 44: Line 44:
===HIF activators===
===HIF activators===
Due to the protective role of HIF, therapies based on small-molecules that stabilize HIF-α have attracted a lot of attention. In pathologies such as ischemia or [https://en.wikipedia.org/wiki/Stroke stroke], HIF activation could help to reduce the damage done by the lack of oxygen and restore tissue functionality. This objective can be achieved by two different ways: inhibition of HIF-PHD pathway or without the inhibition of PHDs <ref name="Davis">PMID: 30671433</ref>.
Due to the protective role of HIF, therapies based on small-molecules that stabilize HIF-α have attracted a lot of attention. In pathologies such as ischemia or [https://en.wikipedia.org/wiki/Stroke stroke], HIF activation could help to reduce the damage done by the lack of oxygen and restore tissue functionality. This objective can be achieved by two different ways: inhibition of HIF-PHD pathway or without the inhibition of PHDs <ref name="Davis">PMID: 30671433</ref>.
-
====HIF-1α Upregulation via Inhibition of PHD Pathway====
+
=====HIF-1α Upregulation via Inhibition of PHD Pathway=====
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
-
*Iron chelators and competitors: Iron chelators reduce the number of free iron (Fe2+) by binding tightly to it. In this way, PHD enzymes do not have enough available iron to carry out the hydroxylation reaction and the expression of HIF-1α is upregulated. Also, iron competitors such as Co2+ or Mn2+ can be used <ref name="Davis">. [https://en.wikipedia.org/wiki/Deferoxamine '''Deferoxamine (DFO)'''] and [https://en.wikipedia.org/wiki/Mimosine '''mimosine'''] were the first iron chelators to mediate HIF-1α neuroprotection. Pre-treatment with DFO protected neurons from oxidative stress-induced death by inhibiting PHDs, therefore increasing mRNA and protein expression of both HIF-1α and its controlled genes <ref>PMID: 10559391</ref>. [https://en.wikipedia.org/wiki/2,2%E2%80%B2-Bipyridine '''2,2-dipyridyl'''] ('''DP''') is a liposoluble iron chelator that upregulates HIF-1α expression. Treatment with this drug decreased expansion of tissue damage after ischemia and protected neurons and endothelial cells by decreasing the amount of [https://en.wikipedia.org/wiki/Reactive_oxygen_species '''reactive oxygen species'''] ('''ROS''') <ref>PMID: 15280435</ref>. Pre-treatment with DP showed more neuroprotection than post-treatment, which makes it difficult to translate into the clinic.
+
*Iron chelators and competitors: Iron chelators reduce the number of free iron (Fe2+) by binding tightly to it. In this way, PHD enzymes do not have enough available iron to carry out the hydroxylation reaction and the expression of HIF-1α is upregulated. Also, iron competitors such as Co2+ or Mn2+ can be used <ref name="Davis"/>. [https://en.wikipedia.org/wiki/Deferoxamine '''Deferoxamine (DFO)'''] and [https://en.wikipedia.org/wiki/Mimosine '''mimosine'''] were the first iron chelators to mediate HIF-1α neuroprotection. Pre-treatment with DFO protected neurons from oxidative stress-induced death by inhibiting PHDs, therefore increasing mRNA and protein expression of both HIF-1α and its controlled genes <ref>PMID: 10559391</ref>. [https://en.wikipedia.org/wiki/2,2%E2%80%B2-Bipyridine '''2,2-dipyridyl'''] ('''DP''') is a liposoluble iron chelator that upregulates HIF-1α expression. Treatment with this drug decreased expansion of tissue damage after ischemia and protected neurons and endothelial cells by decreasing the amount of [https://en.wikipedia.org/wiki/Reactive_oxygen_species '''reactive oxygen species'''] ('''ROS''') <ref>PMID: 15280435</ref>. Pre-treatment with DP showed more neuroprotection than post-treatment, which makes it difficult to translate into the clinic.
*[https://en.wikipedia.org/wiki/Alpha-Ketoglutaric_acid '''2-oxoglutarate''']: is a required co-substrate for the hydroxylation reaction by PHDs. So, compounds such as hydroxybenzenes or their analogous can inhibit PHD action to stabilize HIF-1α an allow gene expression of its targets. [https://pubchem.ncbi.nlm.nih.gov/compound/Dimethyloxalylglycine#section=2D-Structure '''Dimethyloxalylglycine'''] ('''DMOG''') is a cell permeable ester that prevents HIF-1α degradation and increases VEGF levels in ischemic neurons. Studies in animal stroke models showed reduced ischemic injury in neurons and a lower degree of blood-brain barrier damage <ref>PMID: 20407463</ref>.
*[https://en.wikipedia.org/wiki/Alpha-Ketoglutaric_acid '''2-oxoglutarate''']: is a required co-substrate for the hydroxylation reaction by PHDs. So, compounds such as hydroxybenzenes or their analogous can inhibit PHD action to stabilize HIF-1α an allow gene expression of its targets. [https://pubchem.ncbi.nlm.nih.gov/compound/Dimethyloxalylglycine#section=2D-Structure '''Dimethyloxalylglycine'''] ('''DMOG''') is a cell permeable ester that prevents HIF-1α degradation and increases VEGF levels in ischemic neurons. Studies in animal stroke models showed reduced ischemic injury in neurons and a lower degree of blood-brain barrier damage <ref>PMID: 20407463</ref>.
Line 53: Line 53:
*Alternative mechanism of action: Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. Pre-treatment with this drug also showed neuroprotection following permanent cerebral ischemia. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes, conferring neuroprotection<ref>PMID: 29542054</ref>.
*Alternative mechanism of action: Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. Pre-treatment with this drug also showed neuroprotection following permanent cerebral ischemia. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes, conferring neuroprotection<ref>PMID: 29542054</ref>.
-
These treatments have some disadvantages because the iron chelators and 2OG analogues can interfere in different pathways. In this sense, some studies have shown the activation of pro-death proteins on brain cells after treatment with PHD inhibitors. So, novel drugs that specifically target HIF-1α would be a better option<ref name="Davis">.
+
These treatments have some disadvantages because the iron chelators and 2OG analogues can interfere in different pathways. In this sense, some studies have shown the activation of pro-death proteins on brain cells after treatment with PHD inhibitors. So, novel drugs that specifically target HIF-1α would be a better option<ref name="Davis"/>.
-
====HIF-1α Upregulation Without the Inhibition of PHDs====
+
=====HIF-1α Upregulation Without the Inhibition of PHDs=====
These kinds of molecules have been recently discovered. They can upregulate HIF-1α in different ways:
These kinds of molecules have been recently discovered. They can upregulate HIF-1α in different ways:
*'''MiR-335''' is a [https://en.wikipedia.org/wiki/MicroRNA '''microRNA'''] that directly regulates HIF-1α. Treatment with this microRNA decreased infarct volume in rat models when administered early after ischemia induction, but inhibition of miR-335 in later phases surprisingly had beneficial effects. This could be due to the biphasic nature of HIF-1α<ref>PMID: 26030758</ref>.
*'''MiR-335''' is a [https://en.wikipedia.org/wiki/MicroRNA '''microRNA'''] that directly regulates HIF-1α. Treatment with this microRNA decreased infarct volume in rat models when administered early after ischemia induction, but inhibition of miR-335 in later phases surprisingly had beneficial effects. This could be due to the biphasic nature of HIF-1α<ref>PMID: 26030758</ref>.
*'''Proteasome inhibitors''' such as [https://en.wikipedia.org/wiki/MG132 '''MG-132'''] can stabilize HIF-1α, with better prognosis when combined with DMOG. Other proteasome inhibitors, like [https://en.wikipedia.org/wiki/Epoxomicin '''epoxomicin'''] or '''Bsc2118'''<ref>PMID: 23169919</ref>, are also able to reduce infarct size and promote cell survival in ischemic conditions, being even more effective than PHDs inhibitors<ref>PMID: 28566998</ref>.
*'''Proteasome inhibitors''' such as [https://en.wikipedia.org/wiki/MG132 '''MG-132'''] can stabilize HIF-1α, with better prognosis when combined with DMOG. Other proteasome inhibitors, like [https://en.wikipedia.org/wiki/Epoxomicin '''epoxomicin'''] or '''Bsc2118'''<ref>PMID: 23169919</ref>, are also able to reduce infarct size and promote cell survival in ischemic conditions, being even more effective than PHDs inhibitors<ref>PMID: 28566998</ref>.
 +
 +
<br/>
===HIF inhibitors===
===HIF inhibitors===
Line 64: Line 66:
====Indirect HIF inhibitors====
====Indirect HIF inhibitors====
=====Inhibitors of HIF mRNA expression=====
=====Inhibitors of HIF mRNA expression=====
-
EZN-2968 is an RNA antagonist composed of a third-generation oligonucleotide, a technology that specifically binds and inhibits the expression of HIF-1α mRNA. It has shown potent (IC50 = 1–5 nM) and selective inhibition of HIF-1α mRNA and protein expression in both normoxia and hypoxia <ref name="prostate">PMID: 18974394</ref>. Preclinical studies both ''in vitro'' and ''in vivo'' in xenograft prostate cancer mice showed promising results <ref name="prostate">. This compound was evaluated in Phase I clinical trials in patients with advanced solid tumors and was well tolerated <ref>PMID: 27961885</ref>, while a Phase II trial was inconclusive due to premature closure <ref>PMID: 24292632</ref>.
+
EZN-2968 is an RNA antagonist composed of a third-generation oligonucleotide, a technology that specifically binds and inhibits the expression of HIF-1α mRNA. It has shown potent (IC50 = 1–5 nM) and selective inhibition of HIF-1α mRNA and protein expression in both normoxia and hypoxia <ref name="prostate">PMID: 18974394</ref>. Preclinical studies both ''in vitro'' and ''in vivo'' in xenograft prostate cancer mice showed promising results <ref name="prostate"/>. This compound was evaluated in Phase I clinical trials in patients with advanced solid tumors and was well tolerated <ref>PMID: 27961885</ref>, while a Phase II trial was inconclusive due to premature closure <ref>PMID: 24292632</ref>.
=====Inhibitors of HIF protein translation=====
=====Inhibitors of HIF protein translation=====
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.

Revision as of 22:04, 24 November 2020

Crystal structure of N-terminal HIF-2α/HIF-1β Complex with HRE DNA (PDB code 4ZPK)

Drag the structure with the mouse to rotate
Personal tools