Hypoxia-Inducible Factors

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====Indirect HIF inhibitors====
====Indirect HIF inhibitors====
=====Inhibitors of HIF mRNA expression=====
=====Inhibitors of HIF mRNA expression=====
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EZN-2968 is an RNA antagonist composed of a third-generation oligonucleotide, a technology that specifically binds and inhibits the expression of HIF-1α mRNA. It has shown potent (IC50 = 1–5 nM) and selective inhibition of HIF-1α mRNA and protein expression in both normoxia and hypoxia <ref name="prostate">PMID: 18974394</ref>. Preclinical studies both ''in vitro'' and ''in vivo'' in xenograft prostate cancer mice showed promising results <ref name="prostate"/>. This compound was evaluated in Phase I clinical trials in patients with advanced solid tumors and was well tolerated <ref>DOI: 10.1200/jco.2009.27.15_suppl.2564</ref>, while a Phase II trial was inconclusive due to premature closure <ref>PMID: 24292632</ref>.
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EZN-2968 is an RNA antagonist composed of a third-generation oligonucleotide, a technology that specifically binds and inhibits the expression of HIF-1α mRNA. It has shown potent (IC50 = 1–5 nM) and selective inhibition of HIF-1α mRNA and protein expression in both normoxia and hypoxia <ref name="prostate">PMID: 18974394</ref>. Preclinical studies both ''in vitro'' and ''in vivo'' in xenograft prostate cancer mice showed promising results <ref name="prostate"/>. This compound was evaluated in Phase I clinical trials in patients with advanced solid tumors and was well tolerated <ref>Patnaik A, Chiorean EG, Tolcher A, Papadopoulos K, Beeram M, Waddell DK, et al. EZN-2968, a novel hypoxia-inducible factor-1 (HIF-1) messenger ribonucleic acid (mRNA) antagonist: Results of a phase I, pharmacokinetic (PK), dose-escalation study of daily administration in patients (pts) with advanced malignancies. J Clin Oncol. 2009;27(15):2564–2564. [https://ascopubs.org/doi/abs/10.1200/jco.2009.27.15_suppl.2564 doi: 10.1200/jco.2009.27.15_suppl.2564]</ref>, while a Phase II trial was inconclusive due to premature closure <ref>PMID: 24292632</ref>.
=====Inhibitors of HIF protein translation=====
=====Inhibitors of HIF protein translation=====
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.
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*'''Steroidal HIF inhibitors''': [https://pubchem.ncbi.nlm.nih.gov/compound/2-Methoxyestradiol '''2-Methoxyestradiol'''] ('''2ME2''' or panzem) is a natural metabolite of estradiol that inhibits HIF-1α translation and transcriptional activity. Although the specific mechanism by 2ME2 and its synthetic analogues inhibit HIF is unknown, these compounds bind to the [https://pubchem.ncbi.nlm.nih.gov/compound/6167 colchicine] binding site of [[tubulin]] and cause the disruption of tumor interphase microtubules, which results in repression of HIF-1α at translation level <ref>PMID: 12726862</ref>. 2ME2 and its synthetic analogues have shown antitumoral activity in preclinical models as well as favorable oral bioavailability, metabolic stability and safety profiles <ref>PMID: 12726862</ref>. Unfortunately, 2ME2 has been evaluated in several clinical trials both alone and in combination with other drugs and has shown limited efficacy in the treatment of different types of cancer.
*'''Steroidal HIF inhibitors''': [https://pubchem.ncbi.nlm.nih.gov/compound/2-Methoxyestradiol '''2-Methoxyestradiol'''] ('''2ME2''' or panzem) is a natural metabolite of estradiol that inhibits HIF-1α translation and transcriptional activity. Although the specific mechanism by 2ME2 and its synthetic analogues inhibit HIF is unknown, these compounds bind to the [https://pubchem.ncbi.nlm.nih.gov/compound/6167 colchicine] binding site of [[tubulin]] and cause the disruption of tumor interphase microtubules, which results in repression of HIF-1α at translation level <ref>PMID: 12726862</ref>. 2ME2 and its synthetic analogues have shown antitumoral activity in preclinical models as well as favorable oral bioavailability, metabolic stability and safety profiles <ref>PMID: 12726862</ref>. Unfortunately, 2ME2 has been evaluated in several clinical trials both alone and in combination with other drugs and has shown limited efficacy in the treatment of different types of cancer.
=====Inhibitors of HIF stabilization=====
=====Inhibitors of HIF stabilization=====
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*'''HSP90 inhibitors''': The binding of [https://en.wikipedia.org/wiki/Hsp90 '''HSP90'''] to HIF-1α promotes HIF-1α activity by blocking the pVHL-independent proteasomal degradation and also by helping HIF-1α heterodimers acquire the appropriate conformation to recruit p300 and consequently initiate HIF transactivation. The first HSP90 inhibitor identified was the natural product [https://en.wikipedia.org/wiki/Geldanamycin '''geldanamycin'''], a benzoquinone ansamyzine antibiotic that inhibits HSP90 by competing with its ATP binding site. Several HSP90 inhibitors have been developed since, and despite their promising results in preclinical studies, they have demonstrated limited efficacy during clinical trials <ref>DOI: https://doi.org/10.1146/annurev-cancerbio-030518-055533</ref>.
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*'''HSP90 inhibitors''': The binding of [https://en.wikipedia.org/wiki/Hsp90 '''HSP90'''] to HIF-1α promotes HIF-1α activity by blocking the pVHL-independent proteasomal degradation and also by helping HIF-1α heterodimers acquire the appropriate conformation to recruit p300 and consequently initiate HIF transactivation. The first HSP90 inhibitor identified was the natural product [https://en.wikipedia.org/wiki/Geldanamycin '''geldanamycin'''], a benzoquinone ansamyzine antibiotic that inhibits HSP90 by competing with its ATP binding site. Several HSP90 inhibitors have been developed since, and despite their promising results in preclinical studies, they have demonstrated limited efficacy during clinical trials <ref>Jaeger AM, Whitesell L. HSP90: Enabler of Cancer Adaptation. Annu Rev Cancer Biol. 2019;3:275–97. [https://www.annualreviews.org/doi/abs/10.1146/annurev-cancerbio-030518-055533 doi: https://doi.org/10.1146/annurev-cancerbio-030518-055533]</ref>.
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*'''Histone deacetylase inhibitors''' ('''HDACi'''): [[Histone deacetylase | Histone deacetylases]] mediate the removal of acetyl groups from target proteins, regulating their function<ref>PMID: 25746107</ref>. Treatment with HDACi results in the hyperacetylation of histones and other target proteins such as the chaperone HSP90, leading to a loss of activity. It was recently described that this HSP90 inhibition by an HDACi such as [[Zolinza (Vorinostat) | '''Vorinostat''']] leads to an alteration in HIF-1α signaling by interfering with its ability to translocate to the nucleus<ref>PMID: 28915577</ref>, although other mechanisms of alteration of HIF-1α signalling by HDAC1 have been proposed<ref>PMID: 25746107</ref>. Vorinostat and [https://pubchem.ncbi.nlm.nih.gov/compound/Romidepsin '''Romidepsin'''] have been recently approved for the treatment of cutaneous T cell lymphoma (CTCL), and these and others are currently being evaluated for the treatment of various tumors, both alone and in combination with other agents<ref>PMID: 25746107</ref>.
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*'''Histone deacetylase inhibitors''' ('''HDACi'''): [[Histone deacetylase | Histone deacetylases]] mediate the removal of acetyl groups from target proteins, regulating their function<ref>PMID: 25746107</ref>. Treatment with HDACi results in the hyperacetylation of histones and other target proteins such as the chaperone HSP90, leading to a loss of activity. It was recently described that this HSP90 inhibition by an HDACi such as [[Zolinza (Vorinostat) | '''Vorinostat''']] leads to an alteration in HIF-1α signaling by interfering with its ability to translocate to the nucleus<ref>PMID: 28915577</ref>, although other mechanisms of alteration of HIF-1α signalling by HDAC1 have been proposed<ref name="HDAC">PMID: 25746107</ref>. Vorinostat and [https://pubchem.ncbi.nlm.nih.gov/compound/Romidepsin '''Romidepsin'''] have been recently approved for the treatment of cutaneous T cell lymphoma (CTCL), and these and others are currently being evaluated for the treatment of various tumors, both alone and in combination with other agents<ref name="HDAC"/>.
====Direct HIF inhibitors====
====Direct HIF inhibitors====

Revision as of 19:29, 25 November 2020

Crystal structure of N-terminal HIF-2α/HIF-1β Complex with HRE DNA (PDB code 4ZPK)

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