6lix
From Proteopedia
(Difference between revisions)
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==CRL Protein of Arabidopsis== | ==CRL Protein of Arabidopsis== | ||
- | <StructureSection load='6lix' size='340' side='right'caption='[[6lix]]' scene=''> | + | <StructureSection load='6lix' size='340' side='right'caption='[[6lix]], [[Resolution|resolution]] 2.38Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LIX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LIX FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6lix]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LIX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LIX FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lix OCA], [http://pdbe.org/6lix PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lix RCSB], [http://www.ebi.ac.uk/pdbsum/6lix PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lix ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CRL, CAA33, At5g51020, K3K7.20 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lix OCA], [http://pdbe.org/6lix PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lix RCSB], [http://www.ebi.ac.uk/pdbsum/6lix PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lix ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/CRL_ARATH CRL_ARATH]] Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (By similarity). Required for plastid division, and involved in cell differentiation and regulation of the cell division plane. Maintenance of plastid homeostasis controls plant preconditioning to stress and stress acclimation.<ref>PMID:15086805</ref> <ref>PMID:19318374</ref> <ref>PMID:19840398</ref> <ref>PMID:22014227</ref> Confers sensitivity to cabbage leaf curl virus (CaLCuV), probably by supporting viral movement. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The photosynthetic bacterial phycobiliprotein lyases, also called CpcT lyases, catalyze the biogenesis of phycobilisome, a light-harvesting antenna complex, through the covalent attachment of chromophores to the antenna proteins. The Arabidopsis CRUMPLED LEAF (CRL) protein is a homolog of the cyanobacterial CpcT lyase. Loss of CRL leads to multiple lesions including localized foliar cell death, constitutive expression of stress-related nuclear genes, abnormal cell cycle, and impaired plastid division. Notwithstanding the apparent phenotypes, the function of CRL remains still elusive. To gain insight into the CRL function, we examined whether CRL still retains the capacity to bind with the bacterial chromophore phycocyanobilin (PCB) and its plant analog phytochromobilin (PPhiB). The revealed structure of the CpcT domain of CRL was nearly comparable to that of the CpcT lyase, despite the lower sequence identity. The subsequent in vitro biochemical assay found, as shown for the CpcT lyase, that PCB/PPhiB binds to the CRL dimer. However, some mutant forms of CRL, substantially compromised in their bilin-binding aptitude, still restore the crl-induced multiple lesions. These results suggest that although CRL retains the bilin-binding pocket, it seems not functionally associated with the crl-induced multiple lesions. Supporting Information. | ||
+ | |||
+ | The Arabidopsis CRUMPLED LEAF protein, a homolog of the cyanobacterial bilin lyase, retains the bilin-binding pocket for a yet unknown function.,Wang F, Fang J, Guan K, Luo S, Dogra V, Li B, Ma D, Zhao X, Lee KP, Sun P, Xin J, Liu T, Xing W, Kim C Plant J. 2020 Aug 29. doi: 10.1111/tpj.14974. PMID:32860438<ref>PMID:32860438</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6lix" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Arath]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Guan | + | [[Category: Guan, K L]] |
- | [[Category: Sun | + | [[Category: Sun, P K]] |
- | [[Category: Wang | + | [[Category: Wang, F F]] |
- | [[Category: Xing | + | [[Category: Xing, W M]] |
+ | [[Category: A homolog of cyanobacterial cpct lyase]] | ||
+ | [[Category: Lyase]] | ||
+ | [[Category: Plant protein]] |
Revision as of 08:03, 2 December 2020
CRL Protein of Arabidopsis
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