6th0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of Arabidopsis thaliana NAA60 in complex with acetyl-CoA==
==Crystal structure of Arabidopsis thaliana NAA60 in complex with acetyl-CoA==
-
<StructureSection load='6th0' size='340' side='right'caption='[[6th0]]' scene=''>
+
<StructureSection load='6th0' size='340' side='right'caption='[[6th0]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TH0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TH0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6th0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TH0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TH0 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6th0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6th0 OCA], [http://pdbe.org/6th0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6th0 RCSB], [http://www.ebi.ac.uk/pdbsum/6th0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6th0 ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6tgx|6tgx]]</div></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At5g16800, F5E19.140, F5E19_140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6th0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6th0 OCA], [http://pdbe.org/6th0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6th0 RCSB], [http://www.ebi.ac.uk/pdbsum/6th0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6th0 ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
In humans and plants, N-terminal acetylation plays a central role in protein homeostasis, affects 80 % of proteins in the cytoplasm and is catalyzed by five ribosome-associated N-acetyltransferases (NatA-E). Humans also possess a Golgi-associated NatF (HsNAA60) that is essential for Golgi integrity. Remarkably, NAA60 is absent in fungi and was not identified in plants. Here we identify and characterize the first plasma membrane-anchored post-translationally acting N-acetyltransferase AtNAA60 in the reference plant Arabidopsis thaliana by the combined application of reverse genetics, global proteomics, live-cell imaging, microscale thermophoresis, CD-spectroscopy, nano differential scanning fluorometry, intrinsic tryptophan fluorescence and X-ray crystallography. We demonstrate that AtNAA60 like HsNAA60 is membrane-localized in vivo by an alpha-helical membrane anchor at its C-terminus, but in contrast to HsNAA60, AtNAA60 localizes to the plasma membrane. The AtNAA60 crystal structure provides insights into substrate-binding, the broad substrate specificity and the catalytic mechanism probed by structure-based mutagenesis. Characterization of the NAA60 loss-of-function mutants (naa60-1 and naa60-2) uncovers a plasma membrane-localized substrate of AtNAA60 and the importance of NAA60 during high salt stress. Our findings provide evidence for the plant-specific evolution of a plasma membrane-anchored N-acetyltransferase that is vital for adaptation to stress.
 +
 +
The Arabidopsis N(alpha) -acetyltransferase NAA60 locates to the plasma membrane and is vital for the high salt stress response.,Linster E, Layer D, Bienvenut WV, Dinh TV, Weyer FA, Leemhuis W, Brunje A, Hoffrichter M, Miklankova P, Kopp J, Lapouge K, Sindlinger J, Schwarzer D, Meinnel T, Finkemeier I, Giglione C, Hell R, Sinning I, Wirtz M New Phytol. 2020 Jun 16. doi: 10.1111/nph.16747. PMID:32548857<ref>PMID:32548857</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6th0" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Arath]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kopp J]]
+
[[Category: Kopp, J]]
-
[[Category: Lapouge K]]
+
[[Category: Lapouge, K]]
-
[[Category: Layer D]]
+
[[Category: Layer, D]]
-
[[Category: Sinning I]]
+
[[Category: Sinning, I]]
 +
[[Category: N-alpha-acetyltransferase naa60 acetyl-coa natf]]
 +
[[Category: Plant protein]]

Revision as of 12:46, 16 December 2020

Crystal structure of Arabidopsis thaliana NAA60 in complex with acetyl-CoA

PDB ID 6th0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools