6x1h

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==Crystal structure of a guanine nucleotide exchange factor (GEF) domain from the Orientia tsutsugamushi protein OtDUB==
==Crystal structure of a guanine nucleotide exchange factor (GEF) domain from the Orientia tsutsugamushi protein OtDUB==
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<StructureSection load='6x1h' size='340' side='right'caption='[[6x1h]]' scene=''>
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<StructureSection load='6x1h' size='340' side='right'caption='[[6x1h]], [[Resolution|resolution]] 2.91&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X1H OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6X1H FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6x1h]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Oriti Oriti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X1H OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6X1H FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6x1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6x1h OCA], [http://pdbe.org/6x1h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6x1h RCSB], [http://www.ebi.ac.uk/pdbsum/6x1h PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6x1h ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OTT_1962 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=334380 ORITI])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6x1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6x1h OCA], [http://pdbe.org/6x1h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6x1h RCSB], [http://www.ebi.ac.uk/pdbsum/6x1h PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6x1h ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Rho family GTPases regulate an array of cellular processes and are often modulated by pathogens to promote infection. Here, we identify a cryptic guanine nucleotide exchange factor (GEF) domain in the OtDUB protein encoded by the pathogenic bacterium Orientia tsutsugamushi A proteomics-based OtDUB interaction screen identified numerous potential host interactors, including the Rho GTPases Rac1 and Cdc42. We discovered a domain in OtDUB with Rac1/Cdc42 GEF activity (OtDUBGEF), with higher activity toward Rac1 in vitro. While this GEF bears no obvious sequence similarity to known GEFs, crystal structures of OtDUBGEF alone (3.0 A) and complexed with Rac1 (1.7 A) reveal striking convergent evolution, with a unique topology, on a V-shaped bacterial GEF fold shared with other bacterial GEF domains. Structure-guided mutational analyses identified residues critical for activity and a mechanism for nucleotide displacement. Ectopic expression of OtDUB activates Rac1 preferentially in cells, and expression of the OtDUBGEF alone alters cell morphology. Cumulatively, this work reveals a bacterial GEF within the multifunctional OtDUB that co-opts host Rac1 signaling to induce changes in cytoskeletal structure.
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Crystal structure of a guanine nucleotide exchange factor encoded by the scrub typhus pathogen Orientia tsutsugamushi.,Lim C, Berk JM, Blaise A, Bircher J, Koleske AJ, Hochstrasser M, Xiong Y Proc Natl Acad Sci U S A. 2020 Nov 12. pii: 2018163117. doi:, 10.1073/pnas.2018163117. PMID:33184172<ref>PMID:33184172</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6x1h" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lim CS]]
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[[Category: Oriti]]
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[[Category: Xiong Y]]
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[[Category: Lim, C S]]
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[[Category: Xiong, Y]]
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[[Category: Gef]]
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[[Category: Guanine nucleotide exchange factor]]
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[[Category: Orientia tsutsugamushi]]
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[[Category: Scrub typhus]]
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[[Category: Signaling protein]]

Revision as of 12:52, 16 December 2020

Crystal structure of a guanine nucleotide exchange factor (GEF) domain from the Orientia tsutsugamushi protein OtDUB

PDB ID 6x1h

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