1deq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1deq.gif|left|200px]]
[[Image:1deq.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1deq |SIZE=350|CAPTION= <scene name='initialview01'>1deq</scene>, resolution 3.5&Aring;
+
The line below this paragraph, containing "STRUCTURE_1deq", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=UNK:UNKNOWN'>UNK</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1deq| PDB=1deq | SCENE= }}
-
|RELATEDENTRY=[[1fza|1FZA]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1deq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1deq OCA], [http://www.ebi.ac.uk/pdbsum/1deq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1deq RCSB]</span>
+
-
}}
+
'''THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)'''
'''THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
1DEQ is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DEQ OCA].
+
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DEQ OCA].
==Reference==
==Reference==
The crystal structure of modified bovine fibrinogen., Brown JH, Volkmann N, Jun G, Henschen-Edman AH, Cohen C, Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):85-90. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10618375 10618375]
The crystal structure of modified bovine fibrinogen., Brown JH, Volkmann N, Jun G, Henschen-Edman AH, Cohen C, Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):85-90. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10618375 10618375]
-
[[Category: Bos taurus]]
 
-
[[Category: Protein complex]]
 
[[Category: Brown, J H.]]
[[Category: Brown, J H.]]
[[Category: Cohen, C.]]
[[Category: Cohen, C.]]
Line 30: Line 25:
[[Category: Jun, G.]]
[[Category: Jun, G.]]
[[Category: Volkmann, N.]]
[[Category: Volkmann, N.]]
-
[[Category: coiled-coil]]
+
[[Category: Coiled-coil]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 13:46:12 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:40:13 2008''
+

Revision as of 10:46, 2 May 2008

Template:STRUCTURE 1deq

THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)


Overview

Here we report the crystal structure at approximately 4-A resolution of a selectively proteolyzed bovine fibrinogen. This key component in hemostasis is an elongated 340-kDa glycoprotein in the plasma that upon activation by thrombin self-assembles to form the fibrin clot. The crystals are unusual because they are made up of end-to-end bonded molecules that form flexible filaments. We have visualized the entire coiled-coil region of the molecule, which has a planar sigmoidal shape. The primary polymerization receptor pockets at the ends of the molecule face the same way throughout the end-to-end bonded filaments, and based on this conformation, we have developed an improved model of the two-stranded protofibril that is the basic building block in fibrin. Near the middle of the coiled-coil region, the plasmin-sensitive segment is a hinge about which the molecule adopts different conformations. This segment also includes the boundary between the three- and four-stranded portions of the coiled coil, indicating the location on the backbone that anchors the extended flexible Aalpha arm. We suggest that a flexible branch point in the molecule may help accommodate variability in the structure of the fibrin clot.

About this Structure

Full crystallographic information is available from OCA.

Reference

The crystal structure of modified bovine fibrinogen., Brown JH, Volkmann N, Jun G, Henschen-Edman AH, Cohen C, Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):85-90. PMID:10618375 Page seeded by OCA on Fri May 2 13:46:12 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools