We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

Sandbox Reserved 1653

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 7: Line 7:
== Function ==
== Function ==
-
'''The different forces perceived by Piezo'''
+
==='''The different forces perceived by Piezo'''===
Piezo 1 is a mechanosensitive channel which means, like most cells, it can sense external mechanical forces such as fluid flow-induced shear stress,
Piezo 1 is a mechanosensitive channel which means, like most cells, it can sense external mechanical forces such as fluid flow-induced shear stress,
Line 20: Line 20:
-
'''The wide variety of Piezo1’s functions'''
+
==='''The wide variety of Piezo1’s functions'''===
The cells are able to perceive the stomach or bladder to fill, blood flowing and lungs inflate.
The cells are able to perceive the stomach or bladder to fill, blood flowing and lungs inflate.
Line 34: Line 34:
Piezo has a wide variety of functions, but we will focus on the vascularisation.
Piezo has a wide variety of functions, but we will focus on the vascularisation.
-
'''Vascularisation: detection of shearing forces'''
+
==='''Vascularisation: detection of shearing forces'''===
Piezo1 plays a critical role in the formation of blood vessels. Indeed, fluid flow induces a frictional force, and this shear stress activates the piezo1 channels located in endothelial cells’ membranes. It results in an alignment process, leading to a healthy vascular development. The entry of Ca2+ is the
Piezo1 plays a critical role in the formation of blood vessels. Indeed, fluid flow induces a frictional force, and this shear stress activates the piezo1 channels located in endothelial cells’ membranes. It results in an alignment process, leading to a healthy vascular development. The entry of Ca2+ is the
Line 45: Line 45:
== Structure ==
== Structure ==
-
'''Blade'''
+
==='''Blade'''===
 +
 
Piezo 1 has a central domain which is composed of one CTD (C term domain), on cap (or CED), 3 inner helice (IH) and 3 outer helcice (OH).
Piezo 1 has a central domain which is composed of one CTD (C term domain), on cap (or CED), 3 inner helice (IH) and 3 outer helcice (OH).
This central domain is surrounded by 3 extended arms called blades extending out from the central pore in a rotatory manner <ref name ="Alexandra"> Zhou, Z. (2019). Structural Analysis of Piezo1 Ion Channel Reveals the Relationship between Amino Acid Sequence Mutations and Human Diseases. 139–155. DOI 10.4236/jbm.2019.712012 </ref>.
This central domain is surrounded by 3 extended arms called blades extending out from the central pore in a rotatory manner <ref name ="Alexandra"> Zhou, Z. (2019). Structural Analysis of Piezo1 Ion Channel Reveals the Relationship between Amino Acid Sequence Mutations and Human Diseases. 139–155. DOI 10.4236/jbm.2019.712012 </ref>.
Line 55: Line 56:
-
'''Gating mechanism'''
+
==='''Gating mechanism'''===
Piezo 1 possesses delicate force sensing and mechanotransduction mechanisms. Here, we explain how Piezo channels senses and transduces mechanical force
Piezo 1 possesses delicate force sensing and mechanotransduction mechanisms. Here, we explain how Piezo channels senses and transduces mechanical force
to gate the central ion conducting pore.
to gate the central ion conducting pore.
Line 70: Line 71:
image gating ?? ou morphing ??
image gating ?? ou morphing ??
-
'''Ion conducting pore'''
+
==='''Ion conducting pore'''===
The central pore axis of piezo1 is lined with the extracellular cap domain, inner helix and cytosolic CTD. The extracellular cations can approach
The central pore axis of piezo1 is lined with the extracellular cap domain, inner helix and cytosolic CTD. The extracellular cations can approach
the pore entry “vertically through the internal cavity along the threefold axis of the cap domain”, they can also approach laterally through spaces (gaps) between the flexible linkers which connect the cap with inner and outer helices.[2] The ion conduction pathway is situated below the cap, and is
the pore entry “vertically through the internal cavity along the threefold axis of the cap domain”, they can also approach laterally through spaces (gaps) between the flexible linkers which connect the cap with inner and outer helices.[2] The ion conduction pathway is situated below the cap, and is
lined by the three inner transmembrane helices. The possible access for lipids or other hydrophobic molecules through the pore could be “two lateral openings between the inner helices separated by a ‘seal’ formed by K2479 and F2480”. These openings are approximately 11 Å wide and 16 Å tall.
lined by the three inner transmembrane helices. The possible access for lipids or other hydrophobic molecules through the pore could be “two lateral openings between the inner helices separated by a ‘seal’ formed by K2479 and F2480”. These openings are approximately 11 Å wide and 16 Å tall.
-
'''CTD and Beam'''
+
 
 +
==='''CTD and Beam'''===
 +
 
CTD and beams are intracellular. The beam interacts with the CTD, and both are required for mechanical activation of the channel. (architecture)
CTD and beams are intracellular. The beam interacts with the CTD, and both are required for mechanical activation of the channel. (architecture)
The CTD is a trimeric structure and is a part of the pore module of piezo channel. The CTD interacts with the long anchorα, and forms a hydrophobic interface. This forms a tripartite interaction with the glutamate-rich regions of the CTD (mechanogating)
The CTD is a trimeric structure and is a part of the pore module of piezo channel. The CTD interacts with the long anchorα, and forms a hydrophobic interface. This forms a tripartite interaction with the glutamate-rich regions of the CTD (mechanogating)
Line 88: Line 91:
The lever-like mechanotransduction apparatus constituted by the beam is possible because of its uneven movement. It displays large motion at the distal beam while subtle movement at the proximal end (mechanogating) It enables Piezo channels to effectively convert a large conformational change of the distal blades to a relatively slight opening of the central pore, allowing cation-selective permeation. (mechanogating) The L1342 and L1345 residues of the beam act as a pivot to form the lever-like apparatus.
The lever-like mechanotransduction apparatus constituted by the beam is possible because of its uneven movement. It displays large motion at the distal beam while subtle movement at the proximal end (mechanogating) It enables Piezo channels to effectively convert a large conformational change of the distal blades to a relatively slight opening of the central pore, allowing cation-selective permeation. (mechanogating) The L1342 and L1345 residues of the beam act as a pivot to form the lever-like apparatus.
-
'''CED = cap'''
+
==='''CED = cap'''===
 +
 
The CED (carboxyterminal extracellular domain) also called cap is a large extracellular domain in loop shape that forms a trimer.This CED is located in the central module surrounded by the blades and contains 240 residus. [5] <ref name = "Ion Permeation"/>
The CED (carboxyterminal extracellular domain) also called cap is a large extracellular domain in loop shape that forms a trimer.This CED is located in the central module surrounded by the blades and contains 240 residus. [5] <ref name = "Ion Permeation"/>
This CED mediates efficient ion conduction and cation selectivity because which may allow cations to enter or exit the transmembrane pore. For this, the cap structure may provide a mechanism for enriching cation at the extracellular vestibule by utilizing a large patch of negatively charged residues (DEEEED).
This CED mediates efficient ion conduction and cation selectivity because which may allow cations to enter or exit the transmembrane pore. For this, the cap structure may provide a mechanism for enriching cation at the extracellular vestibule by utilizing a large patch of negatively charged residues (DEEEED).

Revision as of 19:31, 6 January 2021

Caption for this structure

Drag the structure with the mouse to rotate

References

  1. 1.0 1.1 1.2 Zhao Q, Wu K, Geng J, Chi S, Wang Y, Zhi P, Zhang M, Xiao B. Ion Permeation and Mechanotransduction Mechanisms of Mechanosensitive Piezo Channels. Neuron. 2016 Mar 16;89(6):1248-1263. doi: 10.1016/j.neuron.2016.01.046. Epub 2016, Feb 25. PMID:26924440 doi:http://dx.doi.org/10.1016/j.neuron.2016.01.046
  2. 2.0 2.1 Parpaite T, Coste B. Piezo channels. Curr Biol. 2017 Apr 3;27(7):R250-R252. doi: 10.1016/j.cub.2017.01.048. PMID:28376327 doi:http://dx.doi.org/10.1016/j.cub.2017.01.048
  3. 3.0 3.1 Zhou, Z. (2019). Structural Analysis of Piezo1 Ion Channel Reveals the Relationship between Amino Acid Sequence Mutations and Human Diseases. 139–155. DOI 10.4236/jbm.2019.712012
  4. Zhao Q, Zhou H, Chi S, Wang Y, Wang J, Geng J, Wu K, Liu W, Zhang T, Dong MQ, Wang J, Li X, Xiao B. Structure and mechanogating mechanism of the Piezo1 channel. Nature. 2018 Feb 22;554(7693):487-492. doi: 10.1038/nature25743. Epub 2018 Jan, 22. PMID:29469092 doi:http://dx.doi.org/10.1038/nature25743
  5. 5.0 5.1 Liang X, Howard J. Structural Biology: Piezo Senses Tension through Curvature. Curr Biol. 2018 Apr 23;28(8):R357-R359. doi: 10.1016/j.cub.2018.02.078. PMID:29689211 doi:http://dx.doi.org/10.1016/j.cub.2018.02.078
Personal tools