6lh1

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==Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter trapped in an outward-facing conformation==
==Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter trapped in an outward-facing conformation==
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<StructureSection load='6lh1' size='340' side='right'caption='[[6lh1]]' scene=''>
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<StructureSection load='6lh1' size='340' side='right'caption='[[6lh1]], [[Resolution|resolution]] 2.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LH1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LH1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6lh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33641 Atcc 33641]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LH1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LH1 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lh1 OCA], [http://pdbe.org/6lh1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lh1 RCSB], [http://www.ebi.ac.uk/pdbsum/6lh1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lh1 ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A6L:2,3-dihydroxypropyl+(9Z)-octadec-9-enoate'>A6L</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7cyg|7cyg]], [[7cyk|7cyk]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NCTC11470_02445 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29484 ATCC 33641])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lh1 OCA], [http://pdbe.org/6lh1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lh1 RCSB], [http://www.ebi.ac.uk/pdbsum/6lh1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lh1 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Apical sodium-dependent bile acid transporter (ASBT) mediates the uptake of bile acids from the ileum lumen into enterocytes and presents a potential target for the treatment of several metabolic diseases, including type 2 diabetes. It has been proposed that the underlying mechanism for transport by ASBT is an elevator-style alternating-access model, which was deduced mainly by comparing high-resolution structures of two bacterial ASBT homologs (ASBTNM from Neisseria meningitides and ASBTYf from Yersinia frederiksenii) in different conformations. However, one important issue is that the only outward-facing structure (PDB entry 4n7x) was obtained with an Na(+)-binding site mutant of ASBTYf, which severely cripples its transport function, and therefore the physiological relevance of the conformation in PDB entry 4n7x requires further careful evaluation. Here, another crystal structure is reported of ASBTYf that was captured in a state closely resembling the conformation in PDB entry 4n7x using an engineered disulfide bridge. The introduced cysteine mutations avoided any proposed Na(+)- or substrate-binding residues, and the resulting mutant retained both structural and functional integrity and behaved similarly to wild-type ASBTYf. These data support the hypothesis that the PDB entry 4n7x-like structure represents a functional outward-facing conformation of ASBTYf in its transport cycle.
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An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter.,Wang X, Lyu Y, Ji Y, Sun Z, Zhou X Acta Crystallogr D Struct Biol. 2021 Jan 1;77(Pt 1):108-116. doi:, 10.1107/S205979832001517X. Epub 2021 Jan 1. PMID:33404530<ref>PMID:33404530</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6lh1" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Journal:Acta Cryst D:S2059798320015004|Journal:Acta Cryst D:S2059798320015004]]
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*[[Journal:Acta Cryst D:S205979832001517X|Journal:Acta Cryst D:S205979832001517X]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 33641]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Ji Y]]
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[[Category: Ji, Y]]
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[[Category: Lyu Y]]
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[[Category: Lyu, Y]]
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[[Category: Sun Z]]
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[[Category: Sun, Z]]
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[[Category: Wang X]]
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[[Category: Wang, X]]
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[[Category: Zhou X]]
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[[Category: Zhou, X]]
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[[Category: Asbt]]
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[[Category: Bile acid transporter]]
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[[Category: Ntcp]]
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[[Category: Slc10]]
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[[Category: Transport protein]]

Revision as of 05:59, 20 January 2021

Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter trapped in an outward-facing conformation

PDB ID 6lh1

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