This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yfp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP==
==STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP==
-
<StructureSection load='1yfp' size='340' side='right' caption='[[1yfp]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='1yfp' size='340' side='right'caption='[[1yfp]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1yfp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YFP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1yfp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YFP FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yfp OCA], [http://pdbe.org/1yfp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yfp RCSB], [http://www.ebi.ac.uk/pdbsum/1yfp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yfp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1yfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yfp OCA], [http://pdbe.org/1yfp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yfp RCSB], [http://www.ebi.ac.uk/pdbsum/1yfp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yfp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 31: Line 31:
==See Also==
==See Also==
-
*[[Green Fluorescent Protein|Green Fluorescent Protein]]
+
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
*[[Green Fluorescent Protein: Research Tool|Green Fluorescent Protein: Research Tool]]
*[[Green Fluorescent Protein: Research Tool|Green Fluorescent Protein: Research Tool]]
== References ==
== References ==
Line 38: Line 38:
</StructureSection>
</StructureSection>
[[Category: Aeqvi]]
[[Category: Aeqvi]]
 +
[[Category: Large Structures]]
[[Category: Elsliger, M A]]
[[Category: Elsliger, M A]]
[[Category: Hanson, G T]]
[[Category: Hanson, G T]]

Revision as of 08:44, 20 January 2021

STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP

PDB ID 1yfp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools