2a4d
From Proteopedia
(Difference between revisions)
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==Structure of the human ubiquitin-conjugating enzyme E2 variant 1 (UEV-1)== | ==Structure of the human ubiquitin-conjugating enzyme E2 variant 1 (UEV-1)== | ||
- | <StructureSection load='2a4d' size='340' side='right' caption='[[2a4d]], [[Resolution|resolution]] 1.69Å' scene=''> | + | <StructureSection load='2a4d' size='340' side='right'caption='[[2a4d]], [[Resolution|resolution]] 1.69Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2a4d]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2a4d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A4D FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UBE2V1, CROC1, UBE2V, UEV1 ([ | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UBE2V1, CROC1, UBE2V, UEV1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ubiquitin--protein_ligase Ubiquitin--protein ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.19 6.3.2.19] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a4d OCA], [https://pdbe.org/2a4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a4d RCSB], [https://www.ebi.ac.uk/pdbsum/2a4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a4d ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/UB2V1_HUMAN UB2V1_HUMAN]] Has no ubiquitin ligase activity on its own. The UBE2V1-UBE2N heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through Lys-63. This type of poly-ubiquitination activates IKK and does not seem to involve protein degradation by the proteasome. Plays a role in the activation of NF-kappa-B mediated by IL1B, TNF, TRAF6 and TRAF2. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage. Promotes TRIM5 capsid-specific restriction activity and the UBE2V1-UBE2N heterodimer acts in concert with TRIM5 to generate 'Lys-63'-linked polyubiquitin chains which activate the MAP3K7/TAK1 complex which in turn results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes.<ref>PMID:9305758</ref> <ref>PMID:9418904</ref> <ref>PMID:11057907</ref> <ref>PMID:9580084</ref> <ref>PMID:9705497</ref> <ref>PMID:20061386</ref> <ref>PMID:21512573</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Human]] | [[Category: Human]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Ubiquitin--protein ligase]] | [[Category: Ubiquitin--protein ligase]] | ||
[[Category: Arrowsmith, C]] | [[Category: Arrowsmith, C]] |
Revision as of 08:25, 27 January 2021
Structure of the human ubiquitin-conjugating enzyme E2 variant 1 (UEV-1)
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Categories: Human | Large Structures | Ubiquitin--protein ligase | Arrowsmith, C | Avvakumov, G V | Bochkarev, A | Dhe-Paganon, S | Edwards, A | Mackenzie, F | Newman, E M | Structural genomic | Sundstrom, M | Walker, J R | Weigelt, J | Xue, S | Alternative splicing | Ligase | Nuclear protein | Sgc | Ubiquitin | Ubiquitin- conjugating enzyme | Ubl conjugation pathway