2egv
From Proteopedia
(Difference between revisions)
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==Crystal structure of rRNA methyltransferase with SAM ligand== | ==Crystal structure of rRNA methyltransferase with SAM ligand== | ||
| - | <StructureSection load='2egv' size='340' side='right' caption='[[2egv]], [[Resolution|resolution]] 1.45Å' scene=''> | + | <StructureSection load='2egv' size='340' side='right'caption='[[2egv]], [[Resolution|resolution]] 1.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2egv]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2egv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EGV FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2egw|2egw]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2egw|2egw]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RsmE ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RsmE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 "Aquifex aeolicus" Huber and Stetter 2001])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2egv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2egv OCA], [https://pdbe.org/2egv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2egv RCSB], [https://www.ebi.ac.uk/pdbsum/2egv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2egv ProSAT], [https://www.topsan.org/Proteins/RSGI/2egv TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/RSME_AQUAE RSME_AQUAE]] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aquifex aeolicus huber and stetter 2001]] | [[Category: Aquifex aeolicus huber and stetter 2001]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Bessho, Y]] | [[Category: Bessho, Y]] | ||
[[Category: Dong, X]] | [[Category: Dong, X]] | ||
Revision as of 12:07, 10 February 2021
Crystal structure of rRNA methyltransferase with SAM ligand
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Categories: Aquifex aeolicus huber and stetter 2001 | Large Structures | Bessho, Y | Dong, X | Structural genomic | Shirouzu, M | Yokoyama, S | M3u | Methyltransferase | National project on protein structural and functional analyse | Nppsfa | Pua domain | Rna methyltransferase | Rrna modification | Rsgi | Rsme | Sam
