6wb6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:56, 3 March 2021) (edit) (undo)
 
Line 1: Line 1:
==2.05 A resolution structure of transferrin 1 from Manduca sexta==
==2.05 A resolution structure of transferrin 1 from Manduca sexta==
-
<StructureSection load='6wb6' size='340' side='right'caption='[[6wb6]]' scene=''>
+
<StructureSection load='6wb6' size='340' side='right'caption='[[6wb6]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WB6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WB6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6wb6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Manduca_sexta Manduca sexta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WB6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WB6 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wb6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wb6 OCA], [http://pdbe.org/6wb6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wb6 RCSB], [http://www.ebi.ac.uk/pdbsum/6wb6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wb6 ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wb6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wb6 OCA], [https://pdbe.org/6wb6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wb6 RCSB], [https://www.ebi.ac.uk/pdbsum/6wb6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wb6 ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Transferrins function in iron sequestration and iron transport by binding iron tightly and reversibly. Vertebrate transferrins coordinate iron through interactions with two tyrosines, an aspartate, a histidine, and a carbonate anion, and conformational changes that occur upon iron binding and release have been described. Much less is known about the structure and functions of insect transferrin-1 (Tsf1), which is present in hemolymph and influences iron homeostasis mostly by unknown mechanisms. Amino acid sequence and biochemical analyses have suggested that iron coordination by Tsf1 differs from that of the vertebrate transferrins. Here we report the first crystal structure (2.05 a resolution) of an insect transferrin. Manduca sexta (MsTsf1) in the holo form exhibits a bilobal fold similar to that of vertebrate transferrins, but its carboxyl-lobe adopts a novel orientation and contacts with the amino-lobe. The structure revealed coordination of a single Fe(3+) ion in the amino-lobe through Tyr90, Tyr204, and two carbonate anions. One carbonate anion is buried near the ferric ion and is coordinated by four residues, whereas the other carbonate anion is solvent exposed and coordinated by Asn121. Notably, these residues are highly conserved in Tsf1 orthologs. Docking analysis suggested that the solvent exposed carbonate position is capable of binding alternative anions. These findings provide a structural basis for understanding Tsf1 function in iron sequestration and transport in insects as well as insight into the similarities and differences in iron homeostasis between insects and humans.
 +
 +
Structural insight into the novel iron-coordination and domain interactions of transferrin-1 from a model insect, Manduca sexta.,Weber JJ, Kashipathy MM, Battaile KP, Go E, Desaire H, Kanost MR, Lovell S, Gorman MJ Protein Sci. 2020 Nov 16. doi: 10.1002/pro.3999. PMID:33197096<ref>PMID:33197096</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6wb6" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Transferrin 3D structures|Transferrin 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Battaile KP]]
+
[[Category: Manduca sexta]]
-
[[Category: Gorman MJ]]
+
[[Category: Battaile, K P]]
-
[[Category: Kashipathy MM]]
+
[[Category: Gorman, M J]]
-
[[Category: Lovell S]]
+
[[Category: Kashipathy, M M]]
-
[[Category: Weber JJ]]
+
[[Category: Lovell, S]]
 +
[[Category: Weber, J J]]
 +
[[Category: Ferric ion binding]]
 +
[[Category: Glycosylated]]
 +
[[Category: Iron-carbonate complex]]
 +
[[Category: Metal transport]]
 +
[[Category: Transferrin]]

Current revision

2.05 A resolution structure of transferrin 1 from Manduca sexta

PDB ID 6wb6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools