2gj3
From Proteopedia
(Difference between revisions)
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==Crystal structure of the FAD-containing PAS domain of the protein NifL from Azotobacter vinelandii.== | ==Crystal structure of the FAD-containing PAS domain of the protein NifL from Azotobacter vinelandii.== | ||
- | <StructureSection load='2gj3' size='340' side='right' caption='[[2gj3]], [[Resolution|resolution]] 1.04Å' scene=''> | + | <StructureSection load='2gj3' size='340' side='right'caption='[[2gj3]], [[Resolution|resolution]] 1.04Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2gj3]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2gj3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_478 Atcc 478]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJ3 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nifL ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nifL ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=354 ATCC 478])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gj3 OCA], [https://pdbe.org/2gj3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gj3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gj3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gj3 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/NIFL_AZOVI NIFL_AZOVI]] Required for the inhibition of NifA activity in response to oxygen and low level of fixed nitrogen. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gj/2gj3_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gj/2gj3_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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[[Category: Atcc 478]] | [[Category: Atcc 478]] | ||
[[Category: Histidine kinase]] | [[Category: Histidine kinase]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Hefti, M]] | [[Category: Hefti, M]] | ||
[[Category: Key, J]] | [[Category: Key, J]] |
Revision as of 19:06, 10 March 2021
Crystal structure of the FAD-containing PAS domain of the protein NifL from Azotobacter vinelandii.
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Categories: Atcc 478 | Histidine kinase | Large Structures | Hefti, M | Key, J | Moffat, K | Purcell, E | Atomic resolution | Fad | Pas domain | Redox sensor | Transferase