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Aldolase 3D structures

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Line 32: Line 32:
**[[4d2j]], [[4tu1]], [[5tjs]] – TgFBPA – ''Toxoplasma gondii''<br />
**[[4d2j]], [[4tu1]], [[5tjs]] – TgFBPA – ''Toxoplasma gondii''<br />
**[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br />
**[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br />
 +
**[[6lnk]] – FBPA – ''Candida albicans''<br />
*FBPA complex
*FBPA complex
Line 73: Line 74:
**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br />
**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br />
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br />
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br />
 +
**[[7nc7]] – FBPA + dihydroxyacetonephosphate – ''Bacillus methanolicus''<br />
*Fructose–6-phosphate aldolase
*Fructose–6-phosphate aldolase
-
**[[4s1f]] – EcF6PA 1 <br />
+
**[[1l6w]], [[4s1f]] – EcF6PA 1 <br />
-
**[[4rz4]], [[4rxg]], [[4rxf]] – EcF6PA 1 (mutant)<br />
+
**[[4rz4]], [[4rxg]], [[4rxf]], [[5zol]] – EcF6PA 1 (mutant)<br />
*Deoxyribose-phosphate aldolase
*Deoxyribose-phosphate aldolase
Line 86: Line 88:
**[[2a4a]] – DERA – ''Plasmodium yoelii''<br />
**[[2a4a]] – DERA – ''Plasmodium yoelii''<br />
**[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br />
**[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br />
-
**[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]] – EcDERA<br />
+
**[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]], [[6z9j]] – EcDERA<br />
-
**[[5emu]], [[5el1]], [[5eky]] - EcDERA (mutant)<br />
+
**[[5emu]], [[5el1]], [[5eky]], [[6z9h]] - EcDERA (mutant)<br />
**[[1jcj]], [[1jcl]] – EcDERA (mutant) + reaction intermediate<br />
**[[1jcj]], [[1jcl]] – EcDERA (mutant) + reaction intermediate<br />
 +
**[[6z9i]] - EcDERA (mutant) + G3P<br />
**[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br />
**[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br />
**[[1mzh]] – AaDERA - ''Aquifex aeolicus''<br />
**[[1mzh]] – AaDERA - ''Aquifex aeolicus''<br />
Line 98: Line 101:
**[[5c6m]] – DERA – ''Shewanella halifasensis''<br />
**[[5c6m]] – DERA – ''Shewanella halifasensis''<br />
**[[5c5y]], [[5c2x]] – DERA – ''Colwellia psychrerythraea''<br />
**[[5c5y]], [[5c2x]] – DERA – ''Colwellia psychrerythraea''<br />
-
**[[6msw]] – DERA (mutant) – ''Bacillus halodurans''<br />
+
**[[6d33]] – BhDERA – ''Bacillus halodurans''<br />
 +
**[[6msw]] – BhDERA (mutant) – ''Bacillus halodurans''<br />
-
*Dehydroneopterin aldolase
+
*Dihydroneopterin aldolase
**[[1sql]] – AtDHNPA + guanine <br />
**[[1sql]] – AtDHNPA + guanine <br />
Line 147: Line 151:
**[[4lrs]], [[4lrt]] – OVA + acetaldehyde dehydrogenase – ''Thermomonospora curvata''<br />
**[[4lrs]], [[4lrt]] – OVA + acetaldehyde dehydrogenase – ''Thermomonospora curvata''<br />
-
*keto-deoxyphosphogluconate aldolase (KDPG)
+
*2-keto-3-deoxy-6-phosphogluconate aldolase (KDPG)
**[[3nzr]] – KDPG – ''Vibrio fischeri''<br />
**[[3nzr]] – KDPG – ''Vibrio fischeri''<br />
Line 164: Line 168:
**[[5xsf]] - ZmKDPG + pyruvate <br />
**[[5xsf]] - ZmKDPG + pyruvate <br />
**[[6ovi]] - KDPG + pyruvate derivative – ''Legionella pneumophila''<br />
**[[6ovi]] - KDPG + pyruvate derivative – ''Legionella pneumophila''<br />
 +
**[[6g3z]] – SsKDPG + KDPG - ''Sulfolobus solfataricus'' <br />
-
*keto-deoxygluconate aldolase (KDG)
+
*2-keto-3-deoxygluconate aldolase (KDG)
**[[2nuw]], [[2nux]] – SaKDG – ''Sulfolobus acidocaldarius''<br />
**[[2nuw]], [[2nux]] – SaKDG – ''Sulfolobus acidocaldarius''<br />
**[[2nuy]] – SaKDG + pyruvate <br />
**[[2nuy]] – SaKDG + pyruvate <br />
-
**[[1w37]] - SsDDPGA – ''Sulfolobus solfataricus''<br />
+
**[[1w37]] - SsDDPGA <br />
 +
**[[6gso]], [[6gt8]], [[6h2r]], [[6h7r]] – SsKDG (mutant)<br />
 +
**[[6h7s]] – SsKDG (mutant) + KDG<br />
 +
**[[6gv2]] – SsKDG (mutant) + KD-galactonate<br />
 +
**[[6g3z]] – SsKDG + KDPG<br />
**[[1w3i]] - SsKDG + pyruvate <br />
**[[1w3i]] - SsKDG + pyruvate <br />
 +
**[[6h2s]] - SsKDG (mutant) + pyruvate <br />
**[[1w3n]] - SsKDG + gluconate<br />
**[[1w3n]] - SsKDG + gluconate<br />
**[[1w3t]] - SsKDG + gluconate + pyruvate <br />
**[[1w3t]] - SsKDG + gluconate + pyruvate <br />
Line 179: Line 189:
**See [[Kdo-8-phosphate synthase]]
**See [[Kdo-8-phosphate synthase]]
-
*Deoxyphosphogalactonate aldolase
+
*2-dehydro-3-deoxy-6-phosphogalactonate aldolase
**[[2v81]] – EcKDPGAL<br />
**[[2v81]] – EcKDPGAL<br />
Line 249: Line 259:
**[[6btg]] – BtFPA + DHAP <br />
**[[6btg]] – BtFPA + DHAP <br />
-
*Sphingosin-1-phosphate aldolase
+
*Sphingosine-1-phosphate Aldolase or Sphingosine-1-phosphate lyase
**[[3mc6]] – ySCDPL1 (mutant) <br />
**[[3mc6]] – ySCDPL1 (mutant) <br />
 +
**[[4q6r]] – hSPL + inhibitor<br />
*Rhamnulose-1-phosphate aldolase
*Rhamnulose-1-phosphate aldolase
Line 258: Line 269:
**[[2v9g]], [[2v9o]], [[2uyu]], [[2uyv]], [[2v9e]], [[2v9f]], [[2v9i]], [[2v9l]], [[2v9m]], [[2v9n]], [[2v29]], [[2v2a]], [[2v2b]], [[1ojr]] – EcRPA (mutant)<br />
**[[2v9g]], [[2v9o]], [[2uyu]], [[2uyv]], [[2v9e]], [[2v9f]], [[2v9i]], [[2v9l]], [[2v9m]], [[2v9n]], [[2v29]], [[2v2a]], [[2v2b]], [[1ojr]] – EcRPA (mutant)<br />
-
*Oxoglutarate aldolase
+
*4-hydroxy-2-oxoglutarate aldolase
**[[3s5n]], [[3s5o]] - hOGA<br />
**[[3s5n]], [[3s5o]] - hOGA<br />
Line 268: Line 279:
**[[3gkf]] – EcLsrFA<br />
**[[3gkf]] – EcLsrFA<br />
**[[3glc]], [[3gnd]] – EcLsrFA + ribose derivative<br />
**[[3glc]], [[3gnd]] – EcLsrFA + ribose derivative<br />
 +
**[[4p2v]] – EcLsrF (mutant) + hydroxt dioxopentyl dihydrogen phosphate <br />
* Hydroxyaspartate aldolase
* Hydroxyaspartate aldolase
Line 284: Line 296:
**[[4v15]] – ThrA – ''Achromobacter xylosoxidans''<br />
**[[4v15]] – ThrA – ''Achromobacter xylosoxidans''<br />
**[[5vye]] – PpThrA + pyridoxime derivative<br />
**[[5vye]] – PpThrA + pyridoxime derivative<br />
 +
**[[7k34]] – ThrA – ''Pseudomonas fluorescens''<br />
*Phenylserine aldolase
*Phenylserine aldolase
Line 301: Line 314:
*Retro-aldolase
*Retro-aldolase
-
**[[3nxf]], [[3o6y]], [[3ud6]], [[4pek]], [[4pej]], [[4pa8]] – RA – artificial gene<br />
+
**[[3b5l]], [[3hoj]], [[3nxf]], [[3o6y]], [[3ud6]], [[4a29]], [[4pek]], [[4pej]], [[4pa8]] – RA – artificial gene<br />
-
**[[4ou1]] – SsRA<br />
+
**[[4ou1]], [[4a2r]], [[4a2s]], [[4pa8]], [[5aou]], [[6tfa]] – SsRA<br />
 +
**[[5an7]] – SsRA + inhibitor<br />
 +
**[[4cdl]] – PpRA + inhibitor<br />
*17-alpha-hydroxyprogesterone aldolase (steroid 17-alpha-hydroxylase /17,20 lyase) see [[Cytochrome P450]]
*17-alpha-hydroxyprogesterone aldolase (steroid 17-alpha-hydroxylase /17,20 lyase) see [[Cytochrome P450]]
}}
}}
[[Category: Topic Page]]
[[Category: Topic Page]]

Revision as of 08:56, 14 March 2021

3D structures of Aldolase

Updated on 14-March-2021

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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