This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2hhc
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of fucosyltransferase NodZ from Bradyrhizobium== | ==Crystal structure of fucosyltransferase NodZ from Bradyrhizobium== | ||
| - | <StructureSection load='2hhc' size='340' side='right' caption='[[2hhc]], [[Resolution|resolution]] 1.54Å' scene=''> | + | <StructureSection load='2hhc' size='340' side='right'caption='[[2hhc]], [[Resolution|resolution]] 1.54Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2hhc]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2hhc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Brasw Brasw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HHC FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nodZ ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nodZ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=133505 BRASW])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hhc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hhc OCA], [https://pdbe.org/2hhc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hhc RCSB], [https://www.ebi.ac.uk/pdbsum/2hhc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hhc ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 12: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/2hhc_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/2hhc_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 27: | Line 27: | ||
</div> | </div> | ||
<div class="pdbe-citations 2hhc" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 2hhc" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[NodS|NodS]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 32: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Brasw]] | [[Category: Brasw]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Brzezinski, K]] | [[Category: Brzezinski, K]] | ||
[[Category: Bujacz, G]] | [[Category: Bujacz, G]] | ||
Revision as of 07:39, 17 March 2021
Crystal structure of fucosyltransferase NodZ from Bradyrhizobium
| |||||||||||

