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7cn8
From Proteopedia
(Difference between revisions)
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==Cryo-EM structure of PCoV_GX spike glycoprotein== | ==Cryo-EM structure of PCoV_GX spike glycoprotein== | ||
| - | <StructureSection load='7cn8' size='340' side='right'caption='[[7cn8]]' scene=''> | + | <StructureSection load='7cn8' size='340' side='right'caption='[[7cn8]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CN8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7cn8]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pangolin_coronavirus Pangolin coronavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CN8 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cn8 OCA], [https://pdbe.org/7cn8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cn8 RCSB], [https://www.ebi.ac.uk/pdbsum/7cn8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cn8 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EIC:LINOLEIC+ACID'>EIC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cn8 OCA], [https://pdbe.org/7cn8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cn8 RCSB], [https://www.ebi.ac.uk/pdbsum/7cn8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cn8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | In recognizing the host cellular receptor and mediating fusion of virus and cell membranes, the spike (S) glycoprotein of coronaviruses is the most critical viral protein for cross-species transmission and infection. Here we determined the cryo-EM structures of the spikes from bat (RaTG13) and pangolin (PCoV_GX) coronaviruses, which are closely related to SARS-CoV-2. All three receptor-binding domains (RBDs) of these two spike trimers are in the "down" conformation, indicating they are more prone to adopt the receptor-binding inactive state. However, we found that the PCoV_GX, but not the RaTG13, spike is comparable to the SARS-CoV-2 spike in binding the human ACE2 receptor and supporting pseudovirus cell entry. We further identified critical residues in the RBD underlying different activities of the RaTG13 and PCoV_GX/SARS-CoV-2 spikes. These results collectively indicate that tight RBD-ACE2 binding and efficient RBD conformational sampling are required for the evolution of SARS-CoV-2 to gain highly efficient infection. | ||
| + | |||
| + | Bat and pangolin coronavirus spike glycoprotein structures provide insights into SARS-CoV-2 evolution.,Zhang S, Qiao S, Yu J, Zeng J, Shan S, Tian L, Lan J, Zhang L, Wang X Nat Commun. 2021 Mar 11;12(1):1607. doi: 10.1038/s41467-021-21767-3. PMID:33707453<ref>PMID:33707453</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7cn8" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Qiao S]] | + | [[Category: Pangolin coronavirus]] |
| - | [[Category: Tian L]] | + | [[Category: Qiao, S]] |
| - | [[Category: Wang X]] | + | [[Category: Tian, L]] |
| - | [[Category: Yu J]] | + | [[Category: Wang, X]] |
| - | [[Category: Zeng J]] | + | [[Category: Yu, J]] |
| - | [[Category: Zhang S]] | + | [[Category: Zeng, J]] |
| + | [[Category: Zhang, S]] | ||
| + | [[Category: Spike]] | ||
| + | [[Category: Viral protein]] | ||
Current revision
Cryo-EM structure of PCoV_GX spike glycoprotein
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Categories: Large Structures | Pangolin coronavirus | Qiao, S | Tian, L | Wang, X | Yu, J | Zeng, J | Zhang, S | Spike | Viral protein
