2hof
From Proteopedia
(Difference between revisions)
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==Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination== | ==Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination== | ||
| - | <StructureSection load='2hof' size='340' side='right' caption='[[2hof]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='2hof' size='340' side='right'caption='[[2hof]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2hof]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2hof]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpp1 Bpp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HOF FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1crx|1crx]], [[4crx|4crx]], [[3crx|3crx]], [[2hoi|2hoi]]</td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1crx|1crx]], [[4crx|4crx]], [[3crx|3crx]], [[2hoi|2hoi]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cre ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cre ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hof OCA], [https://pdbe.org/2hof PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hof RCSB], [https://www.ebi.ac.uk/pdbsum/2hof PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hof ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/RECR_BPP1 RECR_BPP1]] Catalyzes site-specific recombination between two 34-base-pair LOXP sites. Its role is to maintain the phage genome as a monomeric unit-copy plasmid in the lysogenic state. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/2hof_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/2hof_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</div> | </div> | ||
<div class="pdbe-citations 2hof" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 2hof" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Resolvase 3D structures|Resolvase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Bpp1]] | [[Category: Bpp1]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Duyne, G D.Van]] | [[Category: Duyne, G D.Van]] | ||
[[Category: Ghosh, K]] | [[Category: Ghosh, K]] | ||
[[Category: Cre-loxp precleavage synapse]] | [[Category: Cre-loxp precleavage synapse]] | ||
[[Category: Recombination-dna complex]] | [[Category: Recombination-dna complex]] | ||
Revision as of 07:18, 24 March 2021
Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination
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