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== Introduction ==
== Introduction ==
Sterol O-acyltransferase(SOAT), otherwise known as Acyl-coenzyme A:cholesterol acyltransferase(ACAT), is the founding member of the membrane-bound O-acyl [https://en.wikipedia.org/wiki/Transferase transferase](MBOAT) enzyme family. MBOAT enzymes transfer [https://en.wikipedia.org/wiki/Acyl_group acyl chains] onto various substrates, including lipids, peptides, and small proteins. There are 11 MBOAT family members in humans, which participate in a variety of physiological processes.<ref name="Guan">PMID:32424158</ref>
Sterol O-acyltransferase(SOAT), otherwise known as Acyl-coenzyme A:cholesterol acyltransferase(ACAT), is the founding member of the membrane-bound O-acyl [https://en.wikipedia.org/wiki/Transferase transferase](MBOAT) enzyme family. MBOAT enzymes transfer [https://en.wikipedia.org/wiki/Acyl_group acyl chains] onto various substrates, including lipids, peptides, and small proteins. There are 11 MBOAT family members in humans, which participate in a variety of physiological processes.<ref name="Guan">PMID:32424158</ref>
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SOAT specifically catalyzes the [https://en.wikipedia.org/wiki/Fischer–Speier_esterification esterification] of cholesterol for efficient storage within the cell. Cholesterol is a membrane lipid that plays an essential role in maintaining the fluidity and integrity of the membrane, and cholesteryl esters are formed when an excess of cholesterol is present.
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SOAT specifically catalyzes the [https://en.wikipedia.org/wiki/Fischer–Speier_esterification esterification] of cholesterol for efficient storage within the cell. Cholesterol is a membrane lipid that plays an essential role in maintaining the fluidity and integrity of the membrane, and [https://en.wikipedia.org/wiki/Cholesteryl_ester cholesteryl esters] are formed when an excess of cholesterol is present.
== Structure ==
== Structure ==
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The overall structure of the enzyme is a <scene name='87/877559/Tetramer/10'>tetramer</scene> structure or a <scene name='87/877559/Tetramer/11'>dimer of dimers</scene>. The functional building block of SOAT is a <scene name='87/877559/Dimer/3'>dimer</scene> which is made up of two identical <scene name='87/877559/Monomer/5'>monomer</scene> structures. The residues that form the dimer interface are mostly hydrophobic and interact with each other in a shape-complementary manner. Mutating residues within the dimer interface reduced the dimers to monomer fractions, indicating that the dimeric architecture is important for the activity of the enzyme. The dimerization of SOAT is mainly mediated by extensive van der Waals interactions between TM1 in one protomer and the lumenal segment of TM6 and the cytosolic segment of TM9 in the other. TM1, TM5, TM6 and TM9 from the two protomers enclose a deep hydrophobic pocket that is open to the lumenal side. Numerous hydrophobic residues on TM6 and TM9 from one protomer contact those on TM1 from the other protomer. On the intracellular side, hydrophobic residues on IH1 of each protomer interact with each other to stabilize the dimer.
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The overall structure of the enzyme is a <scene name='87/877559/Tetramer/10'>tetramer</scene> structure or a <scene name='87/877559/Tetramer/11'>dimer of dimers</scene>. The functional building block of SOAT is a <scene name='87/877559/Dimer/3'>dimer</scene> which is made up of two identical <scene name='87/877559/Monomer/5'>monomer</scene> structures. The [https://en.wikipedia.org/wiki/Amino_acid residues] that form the dimer interface are mostly hydrophobic and interact with each other in a shape-complementary manner. Mutating residues within the dimer interface reduced the dimers to monomer fractions, indicating that the dimeric architecture is important for the activity of the enzyme. The dimerization of SOAT is mainly mediated by [https://en.wikipedia.org/wiki/Van_der_Waals_force extensive van der Waals interactions] between TM1 in one protomer and the [https://en.wikipedia.org/wiki/Lumen_(anatomy) lumenal segment] of TM6 and the [https://en.wikipedia.org/wiki/Cytosol cytosolic segment] of TM9 in the other. TM1, TM5, TM6 and TM9 from the two protomers enclose a deep hydrophobic pocket that is open to the lumenal side. Numerous hydrophobic residues on TM6 and TM9 from one protomer contact those on TM1 from the other protomer. On the intracellular side, hydrophobic residues on IH1 of each protomer interact with each other to stabilize the dimer.
=== Active Site ===
=== Active Site ===
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== Catalytic Mechanism ==
== Catalytic Mechanism ==
The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the Acyl CoA substrate at the carbonyl carbon, kicking electron density up to the carbonyl oxygen. Shown in brackets, the transition state is stabilized by N421 and newly protonated H460.
The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the Acyl CoA substrate at the carbonyl carbon, kicking electron density up to the carbonyl oxygen. Shown in brackets, the transition state is stabilized by N421 and newly protonated H460.
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[[Image:6p2pmech1.png]]
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[[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]]
From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester.
From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester.
It should be noted that this mechanism is largely hypothesized. Further analysis is needed to confirm the proposed steps. Additionally, the role of W420 is unclear. Mutations of W420A rendered the SOAT enzyme nonfunctional, indicating that it must be essential for catalytic activity. However, its role in the mechanism, direct or indirect, is unknown at this time.
It should be noted that this mechanism is largely hypothesized. Further analysis is needed to confirm the proposed steps. Additionally, the role of W420 is unclear. Mutations of W420A rendered the SOAT enzyme nonfunctional, indicating that it must be essential for catalytic activity. However, its role in the mechanism, direct or indirect, is unknown at this time.
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[[Image:6p2pmech2.png]]
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[[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]]

Revision as of 13:29, 6 April 2021

Human Sterol O-acyltransferase

Human Sterol O-acyltranferase

Drag the structure with the mouse to rotate

References

  1. Guan C, Niu Y, Chen SC, Kang Y, Wu JX, Nishi K, Chang CCY, Chang TY, Luo T, Chen L. Structural insights into the inhibition mechanism of human sterol O-acyltransferase 1 by a competitive inhibitor. Nat Commun. 2020 May 18;11(1):2478. doi: 10.1038/s41467-020-16288-4. PMID:32424158 doi:http://dx.doi.org/10.1038/s41467-020-16288-4

Student Contributors

  • Kylie Pfifer
  • Stepahnie Pellegrino
  • Kaitlyn Roberts

Proteopedia Page Contributors and Editors (what is this?)

Kaitlyn Roberts

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