User:Kaitlyn Roberts/Sandbox 2

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== Catalytic Mechanism ==
== Catalytic Mechanism ==
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The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the Acyl CoA substrate at the carbonyl carbon, kicking electron density up to the carbonyl oxygen. Shown in brackets, the transition state is stabilized by N421 and newly protonated H460.
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The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the <scene name='87/877555/As_residues/4'>Acyl CoA substrate</scene> at the carbonyl carbon, kicking electron density up to the carbonyl oxygen. Shown in brackets, the transition state is <scene name='87/877555/As_acylcoa_interaction/1'>stabilized by N421</scene> and newly protonated H460.
[[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]]
[[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]]
From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester.
From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester.

Revision as of 13:35, 6 April 2021

Human Sterol O-acyltransferase

Human Sterol O-acyltranferase

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References

  1. Guan C, Niu Y, Chen SC, Kang Y, Wu JX, Nishi K, Chang CCY, Chang TY, Luo T, Chen L. Structural insights into the inhibition mechanism of human sterol O-acyltransferase 1 by a competitive inhibitor. Nat Commun. 2020 May 18;11(1):2478. doi: 10.1038/s41467-020-16288-4. PMID:32424158 doi:http://dx.doi.org/10.1038/s41467-020-16288-4

Student Contributors

  • Kylie Pfifer
  • Stepahnie Pellegrino
  • Kaitlyn Roberts

Proteopedia Page Contributors and Editors (what is this?)

Kaitlyn Roberts

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