Sandbox Reserved 1670
From Proteopedia
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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
- | == Function == | + | == Function of your protein == |
- | == | + | == Biological relevance and broader implications == |
- | == | + | == Important amino acids== |
- | + | ||
- | + | ||
== Structural highlights == | == Structural highlights == | ||
+ | |||
The structure is made up of about 60% alpha helices and 30% beta sheets and 10% of other structures like water. the shape of this structure looks like its split in two bulbs with a narrow middle part. you can also find two ligands in each side of the structure. | The structure is made up of about 60% alpha helices and 30% beta sheets and 10% of other structures like water. the shape of this structure looks like its split in two bulbs with a narrow middle part. you can also find two ligands in each side of the structure. | ||
This is a structure to highlight the ligand of the protein while everything else is transparent. This is to show the main structure while highlighting the interaction with the ligand. There are 19 amino acids that are bind to the NAD+ ligand. | This is a structure to highlight the ligand of the protein while everything else is transparent. This is to show the main structure while highlighting the interaction with the ligand. There are 19 amino acids that are bind to the NAD+ ligand. | ||
<scene name='87/873232/Ligand_view/5'>ligands</scene> | <scene name='87/873232/Ligand_view/5'>ligands</scene> | ||
The ligands that can be found in the structure are octanal and NAD+. | The ligands that can be found in the structure are octanal and NAD+. | ||
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+ | == Other important features == | ||
NEED TO REWORD THIS | NEED TO REWORD THIS |
Revision as of 13:54, 7 April 2021
This Sandbox is Reserved from 01/25/2021 through 04/30/2021 for use in Biochemistry taught by Bonnie Hall at Grand View University, Des Moines, USA. This reservation includes Sandbox Reserved 1665 through Sandbox Reserved 1682. |
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Structure of Aldehyde dehydrogenase
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644