Isopeptide bond
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
See [http://en.wikipedia.org/wiki/Isopeptide_bond Isopeptide bond in Wikipedia]. | See [http://en.wikipedia.org/wiki/Isopeptide_bond Isopeptide bond in Wikipedia]. | ||
| - | A search for ''isopeptide'' at the [[PDB]] returns over 200 hits. | + | A search for ''isopeptide bond'' in the keywords records at the [[PDB]] returns over 200 hits (April, 2021). |
The capsid of the HK97 bacteriophage contains isopeptide bonds that cross-link the protein [[chains]] into a protein ''chain mail'' <ref>PMID: 22297521</ref><ref>PMID: 10572124</ref><ref>PMID: 19091865</ref>. | The capsid of the HK97 bacteriophage contains isopeptide bonds that cross-link the protein [[chains]] into a protein ''chain mail'' <ref>PMID: 22297521</ref><ref>PMID: 10572124</ref><ref>PMID: 19091865</ref>. | ||
| + | |||
| + | Examples: | ||
| + | * [[7cap]] is a ubiquitin homotrimer. The C-terminal Gly76 is isopeptide linked to Lys48. | ||
==References== | ==References== | ||
<references /> | <references /> | ||
Revision as of 21:25, 26 April 2021
See Isopeptide bond in Wikipedia.
A search for isopeptide bond in the keywords records at the PDB returns over 200 hits (April, 2021).
The capsid of the HK97 bacteriophage contains isopeptide bonds that cross-link the protein chains into a protein chain mail [1][2][3].
Examples:
- 7cap is a ubiquitin homotrimer. The C-terminal Gly76 is isopeptide linked to Lys48.
References
- ↑ Hendrix RW, Johnson JE. Bacteriophage HK97 capsid assembly and maturation. Adv Exp Med Biol. 2012;726:351-63. doi: 10.1007/978-1-4614-0980-9_15. PMID:22297521 doi:10.1007/978-1-4614-0980-9_15
- ↑ Gilakjan ZA, Kropinski AM. Cloning and analysis of the capsid morphogenesis genes of Pseudomonas aeruginosa bacteriophage D3: another example of protein chain mail? J Bacteriol. 1999 Dec;181(23):7221-7. PMID:10572124
- ↑ Dierkes LE, Peebles CL, Firek BA, Hendrix RW, Duda RL. Mutational analysis of a conserved glutamic acid required for self-catalyzed cross-linking of bacteriophage HK97 capsids. J Virol. 2009 Mar;83(5):2088-98. doi: 10.1128/JVI.02000-08. Epub 2008 Dec 17. PMID:19091865 doi:10.1128/JVI.02000-08
