Autophagy-related protein 3D structures
From Proteopedia
(Difference between revisions)
Line 4: | Line 4: | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
+ | *Autophagy-related protein 2 | ||
+ | |||
+ | **[[6a9e]], [[6a9j]] – yAtg2 21-240/endolysin - yeast<br /> | ||
+ | |||
*Autophagy-related protein 3 | *Autophagy-related protein 3 | ||
- | + | ||
- | **[[2dyt]], [[6ojj]] – yAtg3 | + | **[[2dyt]], [[6ojj]] – yAtg3 <br /> |
*Autophagy-related protein 4 | *Autophagy-related protein 4 | ||
- | + | ||
**[[2z0d]], [[2z0e]], [[2zzp]] – hAtg4B (mutant) + LC3 – human<br /> | **[[2z0d]], [[2z0e]], [[2zzp]] – hAtg4B (mutant) + LC3 – human<br /> | ||
**[[2p82]] – hAtg4A<br /> | **[[2p82]] – hAtg4A<br /> | ||
*Autophagy-related protein 4B | *Autophagy-related protein 4B | ||
- | + | ||
**[[5lxi]], [[5lxh]] – hAtg4B + GABARAP-L1<br /> | **[[5lxi]], [[5lxh]] – hAtg4B + GABARAP-L1<br /> | ||
*Autophagy-related protein 5 | *Autophagy-related protein 5 | ||
- | + | ||
**[[4tq1]] – hAtg5 + TECAIR peptide<br /> | **[[4tq1]] – hAtg5 + TECAIR peptide<br /> | ||
**[[3vqi]] – KmAtg5 – ''Kluyveromyces marxianus''<br /> | **[[3vqi]] – KmAtg5 – ''Kluyveromyces marxianus''<br /> | ||
- | *Autophagy-related protein 7 | + | *Autophagy-related protein 7 |
- | + | ||
**[[3vh1]], [[3vh2]] – yAtg7 <br /> | **[[3vh1]], [[3vh2]] – yAtg7 <br /> | ||
**[[3ruj]], [[3t7f]] – yAtg7 N terminal <br /> | **[[3ruj]], [[3t7f]] – yAtg7 N terminal <br /> | ||
**[[3t7h]], [[4gsj]] – yAtg7 N terminal (mutant)<br /> | **[[3t7h]], [[4gsj]] – yAtg7 N terminal (mutant)<br /> | ||
**[[3t7e]] – yAtg7 C terminal <br /> | **[[3t7e]] – yAtg7 C terminal <br /> | ||
- | **[[5yec]], [[3rui]], [[3vh3]] – yAtg7 C terminal + Atg8<br /> | ||
- | **[[3vh4]] – yAtg7 C terminal + Atg8 + ATP<br /> | ||
- | **[[4gsl]], [[3t7g]], [[3vx8]] – yAtg7 + Atg3<br /> | ||
- | **[[4gsk]] – yAtg7 + Atg10<br /> | ||
*Autophagy-related protein 8 | *Autophagy-related protein 8 | ||
- | + | ||
**[[3m95]] – Atg8 – silk worm <br /> | **[[3m95]] – Atg8 – silk worm <br /> | ||
**[[6aag]] – yAtg8 <br /> | **[[6aag]] – yAtg8 <br /> | ||
**[[2kq7]] – yAtg8 - NMR <br /> | **[[2kq7]] – yAtg8 - NMR <br /> | ||
**[[2kwc]] – yAtg8 (mutant) - NMR <br /> | **[[2kwc]] – yAtg8 (mutant) - NMR <br /> | ||
+ | **[[6wy6]] – yAtg8 + Ede1 peptide<br /> | ||
+ | **[[6aaf]] – yAtg8 + Hfl1 peptide<br /> | ||
+ | |||
+ | *Autophagy-related protein 9 | ||
+ | |||
+ | **[[6wqz]], [[6wr4]], [[7jlo]], [[7jlp]], [[7jlq]] – hAtg9A – Cryo EM<br /> | ||
+ | **[[7d0i]] – Atg9 – fission yeast – Cryo EM<br /> | ||
*Autophagy-related protein 10 | *Autophagy-related protein 10 | ||
- | + | ||
**[[4ebr]] – yAtg10 <br /> | **[[4ebr]] – yAtg10 <br /> | ||
+ | |||
+ | *Autophagy-related protein 11 | ||
+ | |||
+ | **[[6vzf]] – yAtg11 coiled-coil domain <br /> | ||
*Autophagy-related protein 12 | *Autophagy-related protein 12 | ||
- | + | ||
**[[1wz3]] – AtAtg12B – ''Arabidopsis thaliana''<br /> | **[[1wz3]] – AtAtg12B – ''Arabidopsis thaliana''<br /> | ||
Line 53: | Line 64: | ||
*Autophagy-related protein 16 | *Autophagy-related protein 16 | ||
- | + | ||
**[[3a7o]] – yAtg16 coiled-coil domain <br /> | **[[3a7o]] – yAtg16 coiled-coil domain <br /> | ||
**[[3a7p]] – yAtg16 coiled-coil domain (mutant)<br /> | **[[3a7p]] – yAtg16 coiled-coil domain (mutant)<br /> | ||
+ | **[[6sur]], [[6y09]] – mAtg16 141-265 + Rab33B + GTP - mouse<br /> | ||
+ | **[[6zay]] – mAtg16 141-265 + Rab33B + GDP<br /> | ||
+ | |||
+ | *Autophagy-related protein 18 | ||
+ | |||
+ | **[[6kyb]] – yAtg18 <br /> | ||
*Autophagy-related protein 19 | *Autophagy-related protein 19 | ||
- | + | ||
**[[2kzb]] – yAtg19 a-mannosidase binding domain - NMR <br /> | **[[2kzb]] – yAtg19 a-mannosidase binding domain - NMR <br /> | ||
*Autophagy-related protein 101 | *Autophagy-related protein 101 | ||
- | + | ||
**[[4wzg]] – hAtg101 <br /> | **[[4wzg]] – hAtg101 <br /> | ||
*Autophagy-related protein 1+13 | *Autophagy-related protein 1+13 | ||
- | + | ||
**[[4p1n]] – KmAtg1 + KmAtg13<br /> | **[[4p1n]] – KmAtg1 + KmAtg13<br /> | ||
*Autophagy-related protein 3+5+12+16 | *Autophagy-related protein 3+5+12+16 | ||
- | + | ||
**[[4naw]] – hAtg3 peptide + hAtg5 + hAtg12 + hAtg16-1 N terminal<br /> | **[[4naw]] – hAtg3 peptide + hAtg5 + hAtg12 + hAtg16-1 N terminal<br /> | ||
*Autophagy-related protein 5+12+16 | *Autophagy-related protein 5+12+16 | ||
- | + | ||
**[[4gdk]], [[4gdl]] – hAtg5 + hAtg12 + hAtg16-1 N terminal<br /> | **[[4gdk]], [[4gdl]] – hAtg5 + hAtg12 + hAtg16-1 N terminal<br /> | ||
**[[3w1s]] – yAtg5 + yAtg12 + yAtg16 N terminal<br /> | **[[3w1s]] – yAtg5 + yAtg12 + yAtg16 N terminal<br /> | ||
*Autophagy-related protein 5+16 | *Autophagy-related protein 5+16 | ||
- | + | ||
**[[4tq0]] – hAtg5 + hAtg16-1 N terminal<br /> | **[[4tq0]] – hAtg5 + hAtg16-1 N terminal<br /> | ||
**[[2dym]], [[2dyo]] – yAtg5 + yAtg16 N terminal<br /> | **[[2dym]], [[2dyo]] – yAtg5 + yAtg16 N terminal<br /> | ||
*Autophagy-related protein 7+3 | *Autophagy-related protein 7+3 | ||
- | + | ||
**[[3vx8]] – AtAtg7 N terminal + AtAtg3 <br /> | **[[3vx8]] – AtAtg7 N terminal + AtAtg3 <br /> | ||
**[[3t7g]] – yAtg7 N terminal + yAtg3 peptide<br /> | **[[3t7g]] – yAtg7 N terminal + yAtg3 peptide<br /> | ||
Line 90: | Line 107: | ||
*Autophagy-related protein 7+8 | *Autophagy-related protein 7+8 | ||
- | + | ||
**[[3vh3]] – yAtg7 C terminal + yAtg8 (mutant)<br /> | **[[3vh3]] – yAtg7 C terminal + yAtg8 (mutant)<br /> | ||
**[[2li5]] – yAtg7 peptide + yAtg8 (mutant)<br /> | **[[2li5]] – yAtg7 peptide + yAtg8 (mutant)<br /> | ||
Line 97: | Line 114: | ||
*Autophagy-related protein 7+10 | *Autophagy-related protein 7+10 | ||
- | + | ||
**[[4gsk]] – yAtg7 (mutant) + yAtg10 (mutant)<br /> | **[[4gsk]] – yAtg7 (mutant) + yAtg10 (mutant)<br /> | ||
*Autophagy-related protein 8+19 | *Autophagy-related protein 8+19 | ||
- | + | ||
**[[2zpn]] – yAtg8 + yAtg19 peptide<br /> | **[[2zpn]] – yAtg8 + yAtg19 peptide<br /> | ||
*Autophagy-related protein 8+32 | *Autophagy-related protein 8+32 | ||
- | + | ||
**[[3vxw]] – yAtg8 + yAtg32 peptide<br /> | **[[3vxw]] – yAtg8 + yAtg32 peptide<br /> | ||
+ | |||
+ | *Autophagy-related protein 8+40 | ||
+ | |||
+ | **[[7brn]] – yAtg8 + yAtg40 peptide<br /> | ||
*Autophagy-related protein 16+21 | *Autophagy-related protein 16+21 | ||
- | **[[6rgo]] – Atg16 + Atg21 – ''Kluyveromyces lactis''<br /> | + | **[[6rgo]] – Atg16 + Atg21 –'' Kluyveromyces lactis''<br /> |
*Autophagy-related protein 13+101 | *Autophagy-related protein 13+101 | ||
- | + | ||
**[[4yk8]] – Atg13 + Atg101 – fission yeast<br /> | **[[4yk8]] – Atg13 + Atg101 – fission yeast<br /> | ||
*Autophagy-related protein 17+29+31 | *Autophagy-related protein 17+29+31 | ||
- | + | ||
**[[4hpq]] – yAtg17 peptide + yAtg29 + yAtg31 (mutant)<br /> | **[[4hpq]] – yAtg17 peptide + yAtg29 + yAtg31 (mutant)<br /> | ||
*Autophagy-related protein 13+17+29+31 | *Autophagy-related protein 13+17+29+31 | ||
- | + | ||
- | **[[4p1w]] – yAtg13 + yAtg17 peptide + | + | **[[4p1w]] – yAtg13 + yAtg17 peptide + yAtg29 + yAtg31<br /> |
+ | |||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] |
Revision as of 09:47, 27 April 2021
3D Structures of autophagy-related protein
Updated on 27-April-2021