1e9y

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[[Image:1e9y.gif|left|200px]]
[[Image:1e9y.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1e9y |SIZE=350|CAPTION= <scene name='initialview01'>1e9y</scene>, resolution 3.0&Aring;
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The line below this paragraph, containing "STRUCTURE_1e9y", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=NI1:Ni+Binding+Site+For+Residue+B2002'>NI1</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=HAE:ACETOHYDROXAMIC+ACID'>HAE</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1e9y| PDB=1e9y | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e9y OCA], [http://www.ebi.ac.uk/pdbsum/1e9y PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1e9y RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF HELICOBACTER PYLORI UREASE IN COMPLEX WITH ACETOHYDROXAMIC ACID'''
'''CRYSTAL STRUCTURE OF HELICOBACTER PYLORI UREASE IN COMPLEX WITH ACETOHYDROXAMIC ACID'''
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==About this Structure==
==About this Structure==
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1E9Y is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E9Y OCA].
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1E9Y is a [[Protein complex]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E9Y OCA].
==Reference==
==Reference==
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[[Category: Oh, B H.]]
[[Category: Oh, B H.]]
[[Category: Oh, S T.]]
[[Category: Oh, S T.]]
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[[Category: acetohydroxamic acid]]
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[[Category: Acetohydroxamic acid]]
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[[Category: dodecamer]]
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[[Category: Dodecamer]]
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[[Category: helicobacter]]
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[[Category: Helicobacter]]
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[[Category: hydrolase]]
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[[Category: Hydrolase]]
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[[Category: urease]]
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[[Category: Urease]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 14:51:02 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:58:27 2008''
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Revision as of 11:51, 2 May 2008

Template:STRUCTURE 1e9y

CRYSTAL STRUCTURE OF HELICOBACTER PYLORI UREASE IN COMPLEX WITH ACETOHYDROXAMIC ACID


Overview

Helicobacter pylori, an etiologic agent in a variety of gastroduodenal diseases, produces a large amount of urease, which is believed to neutralize gastric acid by producing ammonia for the survival of the bacteria. Up to 30% of the enzyme associates with the surface of intact cells upon lysis of neighboring bacteria. The role of the enzyme at the extracellular location has been a subject of controversy because the purified enzyme is irreversibly inactivated below pH 5. We have determined the crystal structure of H. pylori urease, which has a 1.1 MDa spherical assembly of 12 catalytic units with an outer diameter of approximately 160 A. Under physiologically relevant conditions, the activity of the enzyme remains unaffected down to pH 3. Activity assays under different conditions indicated that the cluster of the 12 active sites on the supramolecular assembly may be critical for the survival of the enzyme at low pH. The structure provides a novel example of a molecular assembly adapted for acid resistance that, together with the low Km value of the enzyme, is likely to enable the organism to inhabit the hostile niche.

About this Structure

1E9Y is a Protein complex structure. Full crystallographic information is available from OCA.

Reference

Supramolecular assembly and acid resistance of Helicobacter pylori urease., Ha NC, Oh ST, Sung JY, Cha KA, Lee MH, Oh BH, Nat Struct Biol. 2001 Jun;8(6):505-9. PMID:11373617 Page seeded by OCA on Fri May 2 14:51:02 2008

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