7dej
From Proteopedia
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==Structure of human ORP3 ORD in apo-form== | ==Structure of human ORP3 ORD in apo-form== | ||
| - | <StructureSection load='7dej' size='340' side='right'caption='[[7dej]]' scene=''> | + | <StructureSection load='7dej' size='340' side='right'caption='[[7dej]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DEJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7dej]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DEJ FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dej OCA], [https://pdbe.org/7dej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dej RCSB], [https://www.ebi.ac.uk/pdbsum/7dej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dej ProSAT]</span></td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OSBPL3, KIAA0704, ORP3, OSBP3 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dej OCA], [https://pdbe.org/7dej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dej RCSB], [https://www.ebi.ac.uk/pdbsum/7dej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dej ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/OSBL3_HUMAN OSBL3_HUMAN]] Phosphoinositide-binding protein which associates with both cell and endoplasmic reticulum (ER) membranes (PubMed:16143324). Can bind to the ER membrane protein VAPA and recruit VAPA to plasma membrane sites, thus linking these intracellular compartments (PubMed:25447204). The ORP3-VAPA complex stimulates RRAS signaling which in turn attenuates integrin beta-1 (ITGB1) activation at the cell surface (PubMed:18270267, PubMed:25447204). With VAPA, may regulate ER morphology (PubMed:16143324). Has a role in regulation of the actin cytoskeleton, cell polarity and cell adhesion (PubMed:18270267). Binds to phosphoinositides with preference for PI(3,4)P2 and PI(3,4,5)P3 (PubMed:16143324). Also binds 25-hydroxycholesterol and cholesterol (PubMed:17428193).<ref>PMID:16143324</ref> <ref>PMID:17428193</ref> <ref>PMID:18270267</ref> <ref>PMID:25447204</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Human ORP3 belongs to the oxysterol-binding protein (OSBP) family of lipid transfer proteins and is involved in lipid trafficking and cell signaling. ORP3 localizes to the ER-PM interfaces and is implicated in lipid transport and focal adhesion dynamics. Here, we report the 2.6-2.7 A structures of the ORD (OSBP-related domain) of human ORP3 in apo-form and in complex with phosphatidylinositol 4-phosphate. The ORP3 ORD displays a helix grip beta-barrel fold with a deep hydrophobic pocket which is conserved in the OSBP gene family. ORP3 binds PI(4)P by the residues around tunnel entrance and in the hydrophobic pocket, whereas it lacks sterol binding due to the narrow hydrophobic tunnel. The heterologous expression of the ORDs of human ORP3 or OSBP1 rescued the lethality of seven ORP (yeast OSH1-OSH7) knockout in yeast. In contrast, the PI(4)P-binding site mutant of ORP3 did not complement the OSH knockout cells. The N-terminal PH domain and FFAT motif of ORP3 are involved in protein targeting but are not essential in yeast complementation. This observation suggests that the essential function conserved in the ORPs of yeast and human is mediated by PI(4)P-binding of the ORD domain. This study suggests that the non-vesicular PI(4)P transport is a conserved function of all ORPs in eukaryotes. | ||
| + | |||
| + | Structure of human ORP3 ORD reveals conservation of a key function and ligand specificity in OSBP-related proteins.,Tong J, Tan L, Im YJ PLoS One. 2021 Apr 15;16(4):e0248781. doi: 10.1371/journal.pone.0248781., eCollection 2021. PMID:33857182<ref>PMID:33857182</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7dej" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Im | + | [[Category: Im, Y J]] |
| - | [[Category: Tan L]] | + | [[Category: Tan, L]] |
| - | [[Category: Tong J]] | + | [[Category: Tong, J]] |
| + | [[Category: Phosphoinositide oxysterol-binding protein lipid transfer protein]] | ||
| + | [[Category: Transport protein]] | ||
Revision as of 05:32, 28 April 2021
Structure of human ORP3 ORD in apo-form
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