1ecb

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[[Image:1ecb.jpg|left|200px]]
[[Image:1ecb.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1ecb |SIZE=350|CAPTION= <scene name='initialview01'>1ecb</scene>, resolution 2.7&Aring;
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The line below this paragraph, containing "STRUCTURE_1ecb", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=NTA:Ntn+Amidotransferase+Active+Site'>NTA</scene>, <scene name='pdbsite=NTB:Ntn+Amidotransferase+Active+Site'>NTB</scene>, <scene name='pdbsite=NTC:Ntn+Amidotransferase+Active+Site'>NTC</scene>, <scene name='pdbsite=NTD:Ntn+Amidotransferase+Active+Site'>NTD</scene>, <scene name='pdbsite=PRA:Phosphoribosyl+transf.+Active+Site.+The+Active+Site+In+T+...'>PRA</scene>, <scene name='pdbsite=PRB:Phosphoribosyl+transf.+Active+Site.+The+Active+Site+In+T+...'>PRB</scene>, <scene name='pdbsite=PRC:Phosphoribosyl+transf.+Active+Site.+The+Active+Site+In+T+...'>PRC</scene> and <scene name='pdbsite=PRT:Phosphoribosyl+transf.+Active+Site.+The+Active+Site+In+T+...'>PRT</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=5GP:GUANOSINE-5&#39;-MONOPHOSPHATE'>5GP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Amidophosphoribosyltransferase Amidophosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.14 2.4.2.14] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= PURF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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-->
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|DOMAIN=
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{{STRUCTURE_1ecb| PDB=1ecb | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ecb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ecb OCA], [http://www.ebi.ac.uk/pdbsum/1ecb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ecb RCSB]</span>
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}}
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'''ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT'''
'''ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT'''
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[[Category: Krahn, J M.]]
[[Category: Krahn, J M.]]
[[Category: Smith, J L.]]
[[Category: Smith, J L.]]
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[[Category: glutamine amidotransferase]]
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[[Category: Glutamine amidotransferase]]
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[[Category: glycosyltransferase]]
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[[Category: Glycosyltransferase]]
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[[Category: gmp]]
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[[Category: Gmp]]
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[[Category: guanine 5'-monophosphate]]
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[[Category: Guanine 5'-monophosphate]]
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[[Category: purine biosynthesis]]
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[[Category: Purine biosynthesis]]
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[[Category: transferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 14:55:42 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:59:45 2008''
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Revision as of 11:55, 2 May 2008

Image:1ecb.jpg

Template:STRUCTURE 1ecb

ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT


Overview

Activation of gluatmine phosphoribosylpyrophosphate (RPPP) amidotransferase (GPATase) by binding of a PRPP substrate analog results in the formation of a 20 A channel connecting the active site for glutamine hydrolysis in one domain with the PRPP site in a second domain. This solvent-inaccessible channel permits transfer of the NH3 intermediate between the two active sites. Tunneling of NH3 may be a common mechanism for glutamine amidotransferase-catalyzed nitrogen transfer and for coordination of catalysis at two distinct active sites in complex enzymes. The 2.4 A crystal structure of the active conformer of GPATase also provides the first description of an intact active site for the phosphoribosyltransferase (PRTase) family of nucleotide synthesis and salvage enzymes. Chemical assistance to catalysis is provided primarily by the substrate and secondarily by the enzyme in the proposed structure-based mechanism. Different catalytic and inhibitory modes of divalent cation binding to the PRTase active site are revealed in the active conformer of the enzyme and in a feedback-inhibited GMP complex.

About this Structure

1ECB is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site., Krahn JM, Kim JH, Burns MR, Parry RJ, Zalkin H, Smith JL, Biochemistry. 1997 Sep 16;36(37):11061-8. PMID:9333323 Page seeded by OCA on Fri May 2 14:55:42 2008

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