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7cc3

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==Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)==
==Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)==
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<StructureSection load='7cc3' size='340' side='right'caption='[[7cc3]]' scene=''>
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<StructureSection load='7cc3' size='340' side='right'caption='[[7cc3]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CC3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7cc3]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CC3 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cc3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cc3 OCA], [https://pdbe.org/7cc3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cc3 RCSB], [https://www.ebi.ac.uk/pdbsum/7cc3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cc3 ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPO:DIPHOSPHATE'>DPO</scene>, <scene name='pdbligand=FQ0:2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,3-diol'>FQ0</scene>, <scene name='pdbligand=FQF:(2R)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol'>FQF</scene>, <scene name='pdbligand=FV3:(2S)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol'>FV3</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cc3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cc3 OCA], [https://pdbe.org/7cc3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cc3 RCSB], [https://www.ebi.ac.uk/pdbsum/7cc3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cc3 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Polyprenyl groups, products of isoprenoid metabolism, are utilized in peptidoglycan biosynthesis, protein N-glycosylation, and other processes. These groups are formed by cis-prenyltransferases, which use allylic prenyl pyrophosphates as prenyl-donors to catalyze the C-prenylation of the general acceptor substrate, isopentenyl pyrophosphate. Repetition of this reaction forms (Z,E-mixed)-polyprenyl pyrophosphates, which are converted later into glycosyl carrier lipids, such as undecaprenyl phosphate and dolichyl phosphate. MM_0014 from the methanogenic archaeon Methanosarcina mazei is known as a versatile cis-prenyltransferase that accepts both isopentenyl pyrophosphate and dimethylallyl pyrophosphate as acceptor substrates. To learn more about this enzyme's catalytic activity, we determined the X-ray crystal structures of MM_0014 in the presence or absence of these substrates. Surprisingly, one structure revealed a complex with O-prenylglycerol, suggesting that the enzyme catalyzed the prenylation of glycerol contained in the crystallization buffer. Further analyses confirmed that the enzyme could catalyze the O-prenylation of small alcohols, such as 2-propanol, expanding our understanding of the catalytic ability of cis-prenyltransferases.
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A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.,Okada M, Unno H, Emi KI, Matsumoto M, Hemmi H J Biol Chem. 2021 Apr 16:100679. doi: 10.1016/j.jbc.2021.100679. PMID:33872599<ref>PMID:33872599</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7cc3" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hemmi H]]
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[[Category: Hemmi, H]]
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[[Category: Unno H]]
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[[Category: Unno, H]]
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[[Category: Archaea]]
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[[Category: Cis-prenyltransferase]]
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[[Category: Farnesylglycerol]]
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[[Category: Isoprenoid]]
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[[Category: Methanosarcina mazei]]
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[[Category: Mm_0014]]
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[[Category: Transferase]]

Revision as of 09:09, 5 May 2021

Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)

PDB ID 7cc3

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