7d17

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==Crystal structure of Macrostomum lignano glutaminyl cyclase==
==Crystal structure of Macrostomum lignano glutaminyl cyclase==
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<StructureSection load='7d17' size='340' side='right'caption='[[7d17]]' scene=''>
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<StructureSection load='7d17' size='340' side='right'caption='[[7d17]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D17 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D17 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7d17]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Macrostomum_lignano Macrostomum lignano]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D17 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D17 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d17 OCA], [https://pdbe.org/7d17 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d17 RCSB], [https://www.ebi.ac.uk/pdbsum/7d17 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d17 ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BOX15_Mlig028993g1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=282301 Macrostomum lignano])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutaminyl-peptide_cyclotransferase Glutaminyl-peptide cyclotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.5 2.3.2.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d17 OCA], [https://pdbe.org/7d17 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d17 RCSB], [https://www.ebi.ac.uk/pdbsum/7d17 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d17 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Proteins with sequence or structure similar to those of di-Zn exopeptidases are usually classified as the M28-family enzymes, including the mammalian-type glutaminyl cyclases (QCs). QC catalyzes protein N-terminal pyroglutamate formation, a posttranslational modification important under many physiological and pathological conditions, and is a drug target for treating neurodegenerative diseases, cancers and inflammatory disorders. Without functional characterization, mammalian QCs and their orthologs remain indistinguishable at the sequence and structure levels from other M28-family proteins, leading to few reported QCs. Here, we show that a low-barrier carboxylic-acid hydrogen-bond network (CAHBN) is required for QC activity and discriminates QCs from M28-family peptidases. We demonstrate that the CAHBN-containing M28 peptidases deposited in the PDB are indeed QCs. Our analyses identify several thousands of QCs from the three domains of life, and we enzymatically and structurally characterize several. For the first time, the interplay between a CAHBN and the binuclear metal-binding center of mammalian QCs is made clear. We found that the presence or absence of CAHBN is a key discriminator for the formation of either the mono-Zn QCs or the di-Zn exopeptidases. Our study helps explain the possible roles of QCs in life.
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A unique carboxylic-acid hydrogen-bond network (CAHBN) confers glutaminyl cyclase activity on M28 family enzymes.,Huang KF, Huang JS, Wu ML, Hsieh WL, Hsu KC, Hsu HL, Ko TP, H-J Wang A J Mol Biol. 2021 Mar 24:166960. doi: 10.1016/j.jmb.2021.166960. PMID:33774034<ref>PMID:33774034</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7d17" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Glutaminyl-peptide cyclotransferase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hsieh W-L]]
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[[Category: Macrostomum lignano]]
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[[Category: Huang J-S]]
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[[Category: Hsieh, W L]]
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[[Category: Huang K-F]]
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[[Category: Huang, J S]]
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[[Category: Wang AH-J]]
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[[Category: Huang, K F]]
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[[Category: Wu M-L]]
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[[Category: Wang, A H.J]]
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[[Category: Wu, M L]]
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[[Category: Glutaminyl cyclase]]
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[[Category: Metal binding protein]]
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[[Category: Transferase]]

Revision as of 09:10, 5 May 2021

Crystal structure of Macrostomum lignano glutaminyl cyclase

PDB ID 7d17

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