1ef0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1ef0.jpg|left|200px]]
[[Image:1ef0.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1ef0 |SIZE=350|CAPTION= <scene name='initialview01'>1ef0</scene>, resolution 2.1&Aring;
+
The line below this paragraph, containing "STRUCTURE_1ef0", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1ef0| PDB=1ef0 | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ef0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ef0 OCA], [http://www.ebi.ac.uk/pdbsum/1ef0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ef0 RCSB]</span>
+
-
}}
+
'''CRYSTAL STRUCTURE OF PI-SCEI MINIPRECURSOR'''
'''CRYSTAL STRUCTURE OF PI-SCEI MINIPRECURSOR'''
Line 23: Line 20:
==Reference==
==Reference==
Structural insights into the protein splicing mechanism of PI-SceI., Poland BW, Xu MQ, Quiocho FA, J Biol Chem. 2000 Jun 2;275(22):16408-13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10828056 10828056]
Structural insights into the protein splicing mechanism of PI-SceI., Poland BW, Xu MQ, Quiocho FA, J Biol Chem. 2000 Jun 2;275(22):16408-13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10828056 10828056]
-
[[Category: H(+)-transporting two-sector ATPase]]
 
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 29: Line 25:
[[Category: Quiocho, F A.]]
[[Category: Quiocho, F A.]]
[[Category: Xu, M Q.]]
[[Category: Xu, M Q.]]
-
[[Category: endonuclease]]
+
[[Category: Endonuclease]]
-
[[Category: mini-precursor]]
+
[[Category: Mini-precursor]]
-
[[Category: protein splicing]]
+
[[Category: Protein splicing]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 15:01:05 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:01:13 2008''
+

Revision as of 12:01, 2 May 2008

Template:STRUCTURE 1ef0

CRYSTAL STRUCTURE OF PI-SCEI MINIPRECURSOR


Overview

PI-SceI is a member of a class of proteins (inteins) that excise themselves from a precursor protein and in the process ligate the flanking protein sequences (exteins). We report here the 2.1-A resolution crystal structure of a PI-SceI miniprecursor (VMA29) containing 10 N-terminal extein residues and 4 C-terminal extein residues. Mutations at the N- and C-terminal splicing junctions, blocking in vivo protein splicing, allowed the miniprecursor to be purified and crystallized. The structure reveals both the N- and C-terminal scissile peptide bonds to be in distorted trans conformations (tau approximately 100 degrees ). Modeling of the wild-type PI-SceI based on the VMA29 structure indicates a large conformational change (movement of >9 A) must occur to allow transesterification to be completed. A zinc atom was discovered at the C-terminal splicing junction. Residues Cys(455), His(453), and Glu(80) along with a water molecule (Wat(53)) chelate the zinc atom. The crystal structure of VMA29 has captured the intein in its pre-spliced state.

About this Structure

1EF0 is a Single protein structure of sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

Reference

Structural insights into the protein splicing mechanism of PI-SceI., Poland BW, Xu MQ, Quiocho FA, J Biol Chem. 2000 Jun 2;275(22):16408-13. PMID:10828056 Page seeded by OCA on Fri May 2 15:01:05 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools