4dkr
From Proteopedia
(Difference between revisions)
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==Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AWS-I-169== | ==Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AWS-I-169== | ||
- | <StructureSection load='4dkr' size='340' side='right' caption='[[4dkr]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='4dkr' size='340' side='right'caption='[[4dkr]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4dkr]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4dkr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hiv-1 Hiv-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DKR FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0LJ:N-[(1R,2R)-2-CARBAMIMIDAMIDO-2,3-DIHYDRO-1H-INDEN-1-YL]-N-(4-CHLORO-3-FLUOROPHENYL)ETHANEDIAMIDE'>0LJ</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0LJ:N-[(1R,2R)-2-CARBAMIMIDAMIDO-2,3-DIHYDRO-1H-INDEN-1-YL]-N-(4-CHLORO-3-FLUOROPHENYL)ETHANEDIAMIDE'>0LJ</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dko|4dko]], [[4dkp|4dkp]], [[4dkq|4dkq]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4dko|4dko]], [[4dkp|4dkp]], [[4dkq|4dkq]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HIV-1 Env ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HIV-1 Env ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11686 HIV-1])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dkr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkr OCA], [https://pdbe.org/4dkr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dkr RCSB], [https://www.ebi.ac.uk/pdbsum/4dkr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkr ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
- | *[[Gp120|Gp120]] | + | *[[Gp120 3D structures|Gp120 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Hiv-1]] | [[Category: Hiv-1]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Courter, J R]] | [[Category: Courter, J R]] | ||
[[Category: Freire, E]] | [[Category: Freire, E]] |
Revision as of 10:12, 19 May 2021
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AWS-I-169
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Categories: Hiv-1 | Large Structures | Courter, J R | Freire, E | III, A B.Smith | Jones, D M | Kobayashi, T | Kwon, Y D | Kwong, P D | LaLonde, J M | Madani, N | Mascola, J | Princiotto, A M | Schon, A | Sodroski, J | Soeta, T | Sun, A W | Wu, X | Aws-i-169 | Cd4 mimic | Clade a/e | Hiv-1 gp120 | Viral protein-inhibitor complex