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2ntp
From Proteopedia
(Difference between revisions)
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==Crystal structure of pectin methylesterase in complex with hexasaccharide VI== | ==Crystal structure of pectin methylesterase in complex with hexasaccharide VI== | ||
| - | <StructureSection load='2ntp' size='340' side='right' caption='[[2ntp]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='2ntp' size='340' side='right'caption='[[2ntp]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2ntp]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2ntp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dicd3 Dicd3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTP FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene>, <scene name='pdbligand=M8C:METHYL+ALPHA-D-GALACTOPYRANURONATE'>M8C</scene>, <scene name='pdbligand=SHB:METHYL+BETA-D-GALACTOPYRANURONATE'>SHB</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene>, <scene name='pdbligand=M8C:METHYL+ALPHA-D-GALACTOPYRANURONATE'>M8C</scene>, <scene name='pdbligand=SHB:METHYL+BETA-D-GALACTOPYRANURONATE'>SHB</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qjv|1qjv]], [[2nsp|2nsp]], [[2nst|2nst]], [[2nt6|2nt6]], [[2nt9|2nt9]], [[2ntb|2ntb]], [[2ntq|2ntq]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1qjv|1qjv]], [[2nsp|2nsp]], [[2nst|2nst]], [[2nt6|2nt6]], [[2nt9|2nt9]], [[2ntb|2ntb]], [[2ntq|2ntq]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pemA, pem ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pemA, pem ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198628 DICD3])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Hydrolase Hydrolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.11 3.1.1.11] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntp OCA], [https://pdbe.org/2ntp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntp RCSB], [https://www.ebi.ac.uk/pdbsum/2ntp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntp ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/PMEA_DICD3 PMEA_DICD3]] Involved in maceration and soft-rotting of plant tissue. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
| - | *[[Methylesterase|Methylesterase]] | + | *[[Methylesterase 3D structures|Methylesterase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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[[Category: Dicd3]] | [[Category: Dicd3]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Brocklehurst, K]] | [[Category: Brocklehurst, K]] | ||
[[Category: Fries, M]] | [[Category: Fries, M]] | ||
Revision as of 15:50, 8 June 2021
Crystal structure of pectin methylesterase in complex with hexasaccharide VI
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