2o1e
From Proteopedia
(Difference between revisions)
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==Crystal Structure of the Metal-dependent Lipoprotein YcdH from Bacillus subtilis, Northeast Structural Genomics Target SR583== | ==Crystal Structure of the Metal-dependent Lipoprotein YcdH from Bacillus subtilis, Northeast Structural Genomics Target SR583== | ||
- | <StructureSection load='2o1e' size='340' side='right' caption='[[2o1e]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='2o1e' size='340' side='right'caption='[[2o1e]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2o1e]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2o1e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O1E FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ycdH, locus_tag=BSU02850 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ycdH, locus_tag=BSU02850 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o1e OCA], [https://pdbe.org/2o1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o1e RCSB], [https://www.ebi.ac.uk/pdbsum/2o1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o1e ProSAT], [https://www.topsan.org/Proteins/NESGC/2o1e TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/ZNUA_BACSU ZNUA_BACSU]] Part of the high-affinity ABC transporter complex ZnuABC involved in zinc import (Probable). ZnuABC-mediated zinc transport is required for comF expression and competence development.<ref>PMID:21813502</ref> <ref>PMID:9811636</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Vibrio subtilis ehrenberg 1835]] | [[Category: Vibrio subtilis ehrenberg 1835]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Acton, T B]] | [[Category: Acton, T B]] | ||
[[Category: Baran, M C]] | [[Category: Baran, M C]] |
Revision as of 15:57, 8 June 2021
Crystal Structure of the Metal-dependent Lipoprotein YcdH from Bacillus subtilis, Northeast Structural Genomics Target SR583
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Categories: Vibrio subtilis ehrenberg 1835 | Large Structures | Acton, T B | Baran, M C | Chen, C X | Cunningham, K | Fang, Y | Forouhar, F | Hunt, J F | Janjua, H | Liu, J | Ma, L C | Montelione, G T | Structural genomic | Seetharaman, J | Tong, L | Xiao, R | Zhou, W | Alpha-beta protein | Nesg | PSI, Protein structure initiative | Unknown function