6r5h
From Proteopedia
(Difference between revisions)
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==Major aspartyl peptidase 1 from C. neoformans== | ==Major aspartyl peptidase 1 from C. neoformans== | ||
- | <StructureSection load='6r5h' size='340' side='right'caption='[[6r5h]]' scene=''> | + | <StructureSection load='6r5h' size='340' side='right'caption='[[6r5h]], [[Resolution|resolution]] 1.75Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R5H FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6r5h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Crynh Crynh]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R5H FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r5h OCA], [https://pdbe.org/6r5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r5h RCSB], [https://www.ebi.ac.uk/pdbsum/6r5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r5h ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CNAG_05872 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=235443 CRYNH])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r5h OCA], [https://pdbe.org/6r5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r5h RCSB], [https://www.ebi.ac.uk/pdbsum/6r5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r5h ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Cryptococcosis is an invasive infection that accounts for 15% of AIDS-related fatalities. Still, treating cryptococcosis remains a significant challenge due to the poor availability of effective antifungal therapies and emergence of drug resistance. Interestingly, protease inhibitor components of antiretroviral therapy regimens have shown some clinical benefits in these opportunistic infections. We investigated Major aspartyl peptidase 1 (May1), a secreted Cryptococcus neoformans protease, as a possible target for the development of drugs that act against both fungal and retroviral aspartyl proteases. Here, we describe the biochemical characterization of May1, present its high-resolution X-ray structure, and provide its substrate specificity analysis. Through combinatorial screening of 11,520 compounds, we identified a potent inhibitor of May1 and HIV protease. This dual-specificity inhibitor exhibits antifungal activity in yeast culture, low cytotoxicity, and low off-target activity against host proteases and could thus serve as a lead compound for further development of May1 and HIV protease inhibitors. | ||
+ | |||
+ | Re-emerging Aspartic Protease Targets: Examining Cryptococcus neoformans Major Aspartyl Peptidase 1 as a Target for Antifungal Drug Discovery.,Krystufek R, Sacha P, Starkova J, Brynda J, Hradilek M, Tloust'ova E, Grzymska J, Rut W, Boucher MJ, Drag M, Majer P, Hajek M, Rezacova P, Madhani HD, Craik CS, Konvalinka J J Med Chem. 2021 May 27;64(10):6706-6719. doi: 10.1021/acs.jmedchem.0c02177. Epub, 2021 May 18. PMID:34006103<ref>PMID:34006103</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6r5h" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Crynh]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Brynda J]] | + | [[Category: Brynda, J]] |
- | [[Category: Konvalinka J]] | + | [[Category: Konvalinka, J]] |
- | [[Category: Krystufek R]] | + | [[Category: Krystufek, R]] |
- | [[Category: Sacha P]] | + | [[Category: Sacha, P]] |
+ | [[Category: Aspartyl protease]] | ||
+ | [[Category: Cryptococcus neoforman]] | ||
+ | [[Category: Hydrolase]] | ||
+ | [[Category: Secreted]] |
Current revision
Major aspartyl peptidase 1 from C. neoformans
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