This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qe7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of the f1-atpase from the thermoalkaliphilic bacterium bacillus sp. ta2.a1==
==Crystal structure of the f1-atpase from the thermoalkaliphilic bacterium bacillus sp. ta2.a1==
-
<StructureSection load='2qe7' size='340' side='right' caption='[[2qe7]], [[Resolution|resolution]] 3.06&Aring;' scene=''>
+
<StructureSection load='2qe7' size='340' side='right'caption='[[2qe7]], [[Resolution|resolution]] 3.06&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2qe7]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ta2.a1 Bacillus sp. ta2.a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QE7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QE7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2qe7]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._ta2.a1 Bacillus sp. ta2.a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QE7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QE7 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1jnv|1jnv]], [[1sky|1sky]]</td></tr>
+
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1jnv|1jnv]], [[1sky|1sky]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atpA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1]), atpC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90973 Bacillus sp. TA2.A1])</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qe7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qe7 OCA], [http://pdbe.org/2qe7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qe7 RCSB], [http://www.ebi.ac.uk/pdbsum/2qe7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qe7 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qe7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qe7 OCA], [https://pdbe.org/2qe7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qe7 RCSB], [https://www.ebi.ac.uk/pdbsum/2qe7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qe7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q71CG2_9BACI Q71CG2_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity).[HAMAP-Rule:MF_00530] [[http://www.uniprot.org/uniprot/Q71CG5_9BACI Q71CG5_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity).[HAMAP-Rule:MF_01346] [[http://www.uniprot.org/uniprot/Q71CG4_9BACI Q71CG4_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (By similarity).[HAMAP-Rule:MF_00815][RuleBase:RU004001][SAAS:SAAS023632_004_025650] [[http://www.uniprot.org/uniprot/Q71CG3_9BACI Q71CG3_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity).[HAMAP-Rule:MF_01347]
+
[[https://www.uniprot.org/uniprot/Q71CG2_9BACI Q71CG2_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity).[HAMAP-Rule:MF_00530] [[https://www.uniprot.org/uniprot/Q71CG5_9BACI Q71CG5_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity).[HAMAP-Rule:MF_01346] [[https://www.uniprot.org/uniprot/Q71CG4_9BACI Q71CG4_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (By similarity).[HAMAP-Rule:MF_00815][RuleBase:RU004001][SAAS:SAAS023632_004_025650] [[https://www.uniprot.org/uniprot/Q71CG3_9BACI Q71CG3_9BACI]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity).[HAMAP-Rule:MF_01347]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 32:
==See Also==
==See Also==
-
*[[ATPase|ATPase]]
+
*[[ATPase 3D structures|ATPase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 38: Line 38:
</StructureSection>
</StructureSection>
[[Category: Bacillus sp. ta2 a1]]
[[Category: Bacillus sp. ta2 a1]]
 +
[[Category: Large Structures]]
[[Category: Cook, G M]]
[[Category: Cook, G M]]
[[Category: Dimroth, P]]
[[Category: Dimroth, P]]

Revision as of 08:17, 25 June 2021

Crystal structure of the f1-atpase from the thermoalkaliphilic bacterium bacillus sp. ta2.a1

PDB ID 2qe7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qe7"
Personal tools