1eqb

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[[Image:1eqb.gif|left|200px]]
[[Image:1eqb.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1eqb |SIZE=350|CAPTION= <scene name='initialview01'>1eqb</scene>, resolution 2.70&Aring;
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The line below this paragraph, containing "STRUCTURE_1eqb", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=FFO:5-FORMYL-6-HYDROFOLIC+ACID'>FFO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycine_hydroxymethyltransferase Glycine hydroxymethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.1 2.1.2.1] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1eqb| PDB=1eqb | SCENE= }}
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|RELATEDENTRY=[[1dfo|1DFO]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eqb OCA], [http://www.ebi.ac.uk/pdbsum/1eqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1eqb RCSB]</span>
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}}
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'''X-RAY CRYSTAL STRUCTURE AT 2.7 ANGSTROMS RESOLUTION OF TERNARY COMPLEX BETWEEN THE Y65F MUTANT OF E-COLI SERINE HYDROXYMETHYLTRANSFERASE, GLYCINE AND 5-FORMYL TETRAHYDROFOLATE'''
'''X-RAY CRYSTAL STRUCTURE AT 2.7 ANGSTROMS RESOLUTION OF TERNARY COMPLEX BETWEEN THE Y65F MUTANT OF E-COLI SERINE HYDROXYMETHYLTRANSFERASE, GLYCINE AND 5-FORMYL TETRAHYDROFOLATE'''
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[[Category: Schirch, V.]]
[[Category: Schirch, V.]]
[[Category: Wright, H T.]]
[[Category: Wright, H T.]]
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[[Category: aat-like fold]]
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[[Category: Aat-like fold]]
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[[Category: functional mutant]]
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[[Category: Functional mutant]]
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[[Category: hydroxymethyltransferase]]
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[[Category: Hydroxymethyltransferase]]
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[[Category: one carbon metabolism]]
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[[Category: One carbon metabolism]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 15:24:12 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:07:40 2008''
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Revision as of 12:24, 2 May 2008

Template:STRUCTURE 1eqb

X-RAY CRYSTAL STRUCTURE AT 2.7 ANGSTROMS RESOLUTION OF TERNARY COMPLEX BETWEEN THE Y65F MUTANT OF E-COLI SERINE HYDROXYMETHYLTRANSFERASE, GLYCINE AND 5-FORMYL TETRAHYDROFOLATE


Overview

Crystal structures of human and rabbit cytosolic serine hydroxymethyltransferase have shown that Tyr65 is likely to be a key residue in the mechanism of the enzyme. In the ternary complex of Escherichia coli serine hydroxymethyltransferase with glycine and 5-formyltetrahydrofolate, the hydroxyl of Tyr65 is one of four enzyme side chains within hydrogen-bonding distance of the carboxylate group of the substrate glycine. To probe the role of Tyr65 it was changed by site-directed mutagenesis to Phe65. The three-dimensional structure of the Y65F site mutant was determined and shown to be isomorphous with the wild-type enzyme except for the missing Tyr hydroxyl group. The kinetic properties of this mutant enzyme in catalyzing reactions with serine, glycine, allothreonine, D- and L-alanine, and 5,10-methenyltetrahydrofolate substrates were determined. The properties of the enzyme with D- and L-alanine, glycine in the absence of tetrahydrofolate, and 5, 10-methenyltetrahydrofolate were not significantly changed. However, catalytic activity was greatly decreased for serine and allothreonine cleavage and for the solvent alpha-proton exchange of glycine in the presence of tetrahydrofolate. The decreased catalytic activity for these reactions could be explained by a greater than 2 orders of magnitude increase in affinity of Y65F mutant serine hydroxymethyltransferase for these amino acids bound as the external aldimine. These data are consistent with a role for the Tyr65 hydroxyl group in the conversion of a closed active site to an open structure.

About this Structure

1EQB is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Role of tyrosine 65 in the mechanism of serine hydroxymethyltransferase., Contestabile R, Angelaccio S, Bossa F, Wright HT, Scarsdale N, Kazanina G, Schirch V, Biochemistry. 2000 Jun 27;39(25):7492-500. PMID:10858298 Page seeded by OCA on Fri May 2 15:24:12 2008

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