6tpl
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==D0-D1 domain of Intimin== | ==D0-D1 domain of Intimin== | ||
| - | <StructureSection load='6tpl' size='340' side='right'caption='[[6tpl]]' scene=''> | + | <StructureSection load='6tpl' size='340' side='right'caption='[[6tpl]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TPL OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6tpl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TPL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TPL FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">eae ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tpl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tpl OCA], [https://pdbe.org/6tpl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tpl RCSB], [https://www.ebi.ac.uk/pdbsum/6tpl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tpl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Enterohemorrhagic and enteropathogenic Escherichia coli are among the most important food-borne pathogens, posing a global health threat. The virulence factor intimin is essential for the attachment of pathogenic E. coli to the intestinal host cell. Intimin consists of four extracellular bacterial immunoglobulin-like (Big) domains, D00-D2, extending into the fifth lectin subdomain (D3) that binds to the Tir-receptor on the host cell. Here, we present the crystal structures of the elusive D00-D0 domains at 1.5 A and D0-D1 at 1.8 A resolution, which confirms that the passenger of intimin has five distinct domains. We describe that D00-D0 exhibits a higher degree of rigidity and D00 likely functions as a juncture domain at the outer membrane-extracellular medium interface. We conclude that D00 is a unique Big domain with a specific topology likely found in a broad range of other inverse autotransporters. The accumulated data allows us to model the complete passenger of intimin and propose functionality to the Big domains, D00-D0-D1, extending directly from the membrane. | ||
| + | |||
| + | The extracellular juncture domains in the intimin passenger adopt a constitutively extended conformation inducing restraints to its sphere of action.,Weikum J, Kulakova A, Tesei G, Yoshimoto S, Jaegerum LV, Schutz M, Hori K, Skepo M, Harris P, Leo JC, Morth JP Sci Rep. 2020 Dec 4;10(1):21249. doi: 10.1038/s41598-020-77706-7. PMID:33277518<ref>PMID:33277518</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6tpl" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Bacillus coli migula 1895]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Leo | + | [[Category: Leo, J C]] |
| - | [[Category: Morth | + | [[Category: Morth, J P]] |
| - | [[Category: Weikum J]] | + | [[Category: Weikum, J]] |
| + | [[Category: Adhesion]] | ||
| + | [[Category: Bacterial ig domain]] | ||
| + | [[Category: Big domain]] | ||
| + | [[Category: Cell adhesion]] | ||
| + | [[Category: Ig]] | ||
| + | [[Category: Intimin]] | ||
| + | [[Category: Passenger domain]] | ||
Revision as of 10:40, 28 July 2021
D0-D1 domain of Intimin
| |||||||||||
