7jx5
From Proteopedia
(Difference between revisions)
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==Crystal Structure of N-Lysine Peptoid-modified Collagen Triple Helix== | ==Crystal Structure of N-Lysine Peptoid-modified Collagen Triple Helix== | ||
- | <StructureSection load='7jx5' size='340' side='right'caption='[[7jx5]]' scene=''> | + | <StructureSection load='7jx5' size='340' side='right'caption='[[7jx5]], [[Resolution|resolution]] 1.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JX5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7jx5]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JX5 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jx5 OCA], [https://pdbe.org/7jx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jx5 RCSB], [https://www.ebi.ac.uk/pdbsum/7jx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jx5 ProSAT]</span></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=04Q:N-BENZYLGLYCINE'>04Q</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr> |
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7jx4|7jx4]]</div></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jx5 OCA], [https://pdbe.org/7jx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jx5 RCSB], [https://www.ebi.ac.uk/pdbsum/7jx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jx5 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | As the only ribosomally encoded N-substituted amino acid, proline promotes distinct secondary protein structures. The high proline content in collagen, the most abundant protein in the human body, is crucial to forming its hallmark structure: the triple-helix. For over five decades, proline has been considered compulsory for synthetic designs aimed at recapitulating collagen's structure and properties. Here we describe that N-substituted glycines (N-glys), also known as peptoid residues, exhibit a general triple-helical propensity similar to or greater than proline, enabling synthesis of stable triple-helical collagen mimetic peptides (CMPs) with unprecedented side chain diversity. Supported by atomic-resolution crystal structures as well as circular dichroism and computational characterizations spanning over 30 N-gly-containing CMPs, we discovered that N-glys stabilize the triple-helix primarily by sterically preorganizing individual chains into the polyproline-II helix. We demonstrated that N-glys with exotic side chains including a "click"-able alkyne and a photosensitive side chain enable CMPs for functional applications including the spatiotemporal control of cell adhesion and migration. The structural principles uncovered in this study open up opportunities for a new generation of collagen-mimetic therapeutics and materials. | ||
+ | |||
+ | Peptoid Residues Make Diverse, Hyperstable Collagen Triple-Helices.,Kessler JL, Kang G, Qin Z, Kang H, Whitby FG, Cheatham TE 3rd, Hill CP, Li Y, Yu SM J Am Chem Soc. 2021 Jul 13. doi: 10.1021/jacs.1c00708. PMID:34255504<ref>PMID:34255504</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7jx5" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Hill | + | [[Category: Hill, C P]] |
- | [[Category: Kessler | + | [[Category: Kessler, J L]] |
- | [[Category: Whitby | + | [[Category: Whitby, F G]] |
- | [[Category: Yang | + | [[Category: Yang, L D]] |
- | [[Category: Yu | + | [[Category: Yu, M S]] |
+ | [[Category: Collagen]] | ||
+ | [[Category: Hyper-stable]] | ||
+ | [[Category: Peptoid]] | ||
+ | [[Category: Protein fibril]] | ||
+ | [[Category: Triple helix]] |
Revision as of 10:49, 28 July 2021
Crystal Structure of N-Lysine Peptoid-modified Collagen Triple Helix
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Categories: Large Structures | Hill, C P | Kessler, J L | Whitby, F G | Yang, L D | Yu, M S | Collagen | Hyper-stable | Peptoid | Protein fibril | Triple helix