7o1s

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==Complex-B bound [FeFe]-hydrogenase maturase HydE fromT. Maritima (Wild-type protein)==
==Complex-B bound [FeFe]-hydrogenase maturase HydE fromT. Maritima (Wild-type protein)==
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<StructureSection load='7o1s' size='340' side='right'caption='[[7o1s]]' scene=''>
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<StructureSection load='7o1s' size='340' side='right'caption='[[7o1s]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O1S FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7o1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thema Thema]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O1S FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o1s OCA], [https://pdbe.org/7o1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o1s RCSB], [https://www.ebi.ac.uk/pdbsum/7o1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o1s ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=H2S:HYDROSULFURIC+ACID'>H2S</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7o1o|7o1o]], [[7o1p|7o1p]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM_1269, THEMA_07990, Tmari_1274 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o1s OCA], [https://pdbe.org/7o1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o1s RCSB], [https://www.ebi.ac.uk/pdbsum/7o1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o1s ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/HYDE_THEMA HYDE_THEMA]] Required for the maturation of the [FeFe]-hydrogenase HydA (By similarity). Catalyzes the reductive cleavage of S-adenosyl-L-methionine (in vitro), suggesting it may contribute to the biosynthesis of an essential sulfur-containing ligand that binds to the hydrogenase active site [2Fe-2S] cluster (PubMed:16137685).[UniProtKB:Q97IK9]<ref>PMID:16137685</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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[FeFe]-hydrogenases use a unique organometallic complex, termed the H cluster, to reversibly convert H2 into protons and low-potential electrons. It can be best described as a [Fe4S4] cluster coupled to a unique [2Fe]H center where the reaction actually takes place. The latter corresponds to two iron atoms, each of which is bound by one CN(-) ligand and one CO ligand. The two iron atoms are connected by a unique azadithiolate molecule ((-)S-CH2-NH-CH2-S(-)) and an additional bridging CO. This [2Fe]H center is built stepwise thanks to the well-orchestrated action of maturating enzymes that belong to the Hyd machinery. Among them, HydG converts l-tyrosine into CO and CN(-) to produce a unique l-cysteine-Fe(CO)2CN species termed complex-B. Very recently, HydE was shown to perform radical-based chemistry using synthetic complex-B as a substrate. Here we report the high-resolution crystal structure that establishes the identity of the complex-B-bound HydE. By triggering the reaction prior to crystallization, we trapped a new five-coordinate Fe species, supporting the proposal that HydE performs complex modifications of complex-B to produce a monomeric "SFe(CO)2CN" precursor to the [2Fe]H center. Substrate access, product release, and intermediate transfer are also discussed.
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Crystal Structure of the [FeFe]-Hydrogenase Maturase HydE Bound to Complex-B.,Rohac R, Martin L, Liu L, Basu D, Tao L, Britt RD, Rauchfuss TB, Nicolet Y J Am Chem Soc. 2021 Jun 9;143(22):8499-8508. doi: 10.1021/jacs.1c03367. Epub 2021, May 28. PMID:34048236<ref>PMID:34048236</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7o1s" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Basu D]]
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[[Category: Thema]]
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[[Category: Britt RD]]
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[[Category: Basu, D]]
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[[Category: Liu L]]
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[[Category: Britt, R D]]
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[[Category: Martin L]]
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[[Category: Liu, L]]
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[[Category: Nicolet Y]]
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[[Category: Martin, L]]
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[[Category: Rauchfuss T]]
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[[Category: Nicolet, Y]]
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[[Category: Rohac R]]
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[[Category: Rauchfuss, T]]
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[[Category: Tao L]]
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[[Category: Rohac, R]]
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[[Category: Tao, L]]
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[[Category: Hydrogenase maturase]]
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[[Category: Metal binding protein]]
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[[Category: Metalloprotein]]
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[[Category: Radical sam protein]]

Revision as of 06:22, 18 August 2021

Complex-B bound [FeFe]-hydrogenase maturase HydE fromT. Maritima (Wild-type protein)

PDB ID 7o1s

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