7lrn
From Proteopedia
(Difference between revisions)
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==Structure of the Siderophore Interacting Protein from Acinetbacter baumannii== | ==Structure of the Siderophore Interacting Protein from Acinetbacter baumannii== | ||
- | <StructureSection load='7lrn' size='340' side='right'caption='[[7lrn]]' scene=''> | + | <StructureSection load='7lrn' size='340' side='right'caption='[[7lrn]], [[Resolution|resolution]] 2.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LRN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LRN FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7lrn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aciba Aciba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LRN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LRN FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lrn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lrn OCA], [https://pdbe.org/7lrn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lrn RCSB], [https://www.ebi.ac.uk/pdbsum/7lrn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lrn ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">A7M79_07860, BGC29_02895 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=470 ACIBA])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lrn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lrn OCA], [https://pdbe.org/7lrn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lrn RCSB], [https://www.ebi.ac.uk/pdbsum/7lrn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lrn ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Acinetobacter baumannii is an opportunistic pathogen with a high mortality rate due to multi-drug-resistant strains. The synthesis and uptake of the iron-chelating siderophores acinetobactin (Acb) and preacinetobactin (pre-Acb) have been shown to be essential for virulence. Here, we report the kinetic and structural characterization of BauF, a flavin-dependent siderophore-interacting protein (SIP) required for the reduction of Fe(III) bound to Acb/pre-Acb and release of Fe(II). Stopped-flow spectrophotometric studies of the reductive half-reaction show that BauF forms a stable neutral flavin semiquinone intermediate. Reduction with NAD(P)H is very slow (k obs, 0.001 s(-1)) and commensurate with the rate of reduction by photobleaching, suggesting that NAD(P)H are not the physiological partners of BauF. The reduced BauF was oxidized by Acb-Fe (k obs, 0.02 s(-1)) and oxazole pre-Acb-Fe (ox-pre-Acb-Fe) (k obs, 0.08 s(-1)), a rigid analogue of pre-Acb, at a rate 3-11 times faster than that with molecular oxygen alone. The structure of FAD-bound BauF was solved at 2.85 A and was found to share a similarity to Shewanella SIPs. The biochemical and structural data presented here validate the role of BauF in A. baumannii iron assimilation and provide information important for drug design. | ||
+ | |||
+ | Structural and Biochemical Characterization of the Flavin-Dependent Siderophore-Interacting Protein from Acinetobacter baumannii.,Valentino H, Korasick DA, Bohac TJ, Shapiro JA, Wencewicz TA, Tanner JJ, Sobrado P ACS Omega. 2021 Jul 6;6(28):18537-18547. doi: 10.1021/acsomega.1c03047., eCollection 2021 Jul 20. PMID:34308084<ref>PMID:34308084</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7lrn" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Aciba]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Korasick | + | [[Category: Korasick, D A]] |
- | [[Category: Tanner | + | [[Category: Tanner, J J]] |
+ | [[Category: Flavin binding]] | ||
+ | [[Category: Oxidoreductase]] | ||
+ | [[Category: Siderophore-interacting protein]] |
Revision as of 06:34, 25 August 2021
Structure of the Siderophore Interacting Protein from Acinetbacter baumannii
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